Gene CPF_2141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2141 
Symbol 
ID4203441 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2385010 
End bp2385783 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content28% 
IMG OID638083006 
ProductRNA methyltransferase 
Protein accessionYP_696569 
Protein GI110799854 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0566] rRNA methylases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTAGAAA TCGAAAGTAA AAACAATAAC TTATTTAAAG AGATAAAAAA GTTAAAAGAA 
AAAAAGCATA GAATAAAGAG TAATAAGTAT CTTATTGAAG GTTTAAGATT TGTAGAGGAA
GCTATAAAAA GTAAAGTATC AATAGATTCA ATAATTTTTA CAGAAAGTTT TAAGGAGAAA
AATCCTGACT TATTCTTAAA AATTAATGAA AATATAAAGC TTATACAAAT GAATGAAACT
CTTTTAAAAC AACTTTGTTC AACGGAAAAT CCACAAGGAA TTGTTGGTGT TATAAATATG
CAAAACAAGG AATTAAAAAG TGGAGAGCTA GTTGTTTTAG TAGATAAGGT TCAAGATCCA
GGAAATATGG GAACAATAAT AAGAACAGCT CATGCAGCAG GTGCAGCAGG AATAGTAATG
ACTAAAGGTA CTGTTGACAT ATATAACGAT AAGACTCTAA GATCAACAAT GGGTTCAATA
TTTTATATTC CAATTGTTGA GGATAATTCT TTAGATTTTG TAAAATCATT AAAGAAGGAA
GGGTATAAAC TTGTAGTAAG TTCTCTTCAA GGAAAAAATA ATTTCTTTGA AGAAAATCTT
CAAGGAAAAG TTATGATAGC TGTTGGTAAT GAGGGAAATG GTGTCAGTGA TGAAGTATAT
GATATTGCAG ACATAAAAGT TAAAATTCCT ATGCCTGGTG AAGCTGAATC TTTAAATGTA
GCTGTAGCTA CTTCTATAAT GATATATGAA AAGATAAGAC AATCATTTAA ATAA
 
Protein sequence
MLEIESKNNN LFKEIKKLKE KKHRIKSNKY LIEGLRFVEE AIKSKVSIDS IIFTESFKEK 
NPDLFLKINE NIKLIQMNET LLKQLCSTEN PQGIVGVINM QNKELKSGEL VVLVDKVQDP
GNMGTIIRTA HAAGAAGIVM TKGTVDIYND KTLRSTMGSI FYIPIVEDNS LDFVKSLKKE
GYKLVVSSLQ GKNNFFEENL QGKVMIAVGN EGNGVSDEVY DIADIKVKIP MPGEAESLNV
AVATSIMIYE KIRQSFK