Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2141 |
Symbol | |
ID | 4203441 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2385010 |
End bp | 2385783 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638083006 |
Product | RNA methyltransferase |
Protein accession | YP_696569 |
Protein GI | 110799854 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTAGAAA TCGAAAGTAA AAACAATAAC TTATTTAAAG AGATAAAAAA GTTAAAAGAA AAAAAGCATA GAATAAAGAG TAATAAGTAT CTTATTGAAG GTTTAAGATT TGTAGAGGAA GCTATAAAAA GTAAAGTATC AATAGATTCA ATAATTTTTA CAGAAAGTTT TAAGGAGAAA AATCCTGACT TATTCTTAAA AATTAATGAA AATATAAAGC TTATACAAAT GAATGAAACT CTTTTAAAAC AACTTTGTTC AACGGAAAAT CCACAAGGAA TTGTTGGTGT TATAAATATG CAAAACAAGG AATTAAAAAG TGGAGAGCTA GTTGTTTTAG TAGATAAGGT TCAAGATCCA GGAAATATGG GAACAATAAT AAGAACAGCT CATGCAGCAG GTGCAGCAGG AATAGTAATG ACTAAAGGTA CTGTTGACAT ATATAACGAT AAGACTCTAA GATCAACAAT GGGTTCAATA TTTTATATTC CAATTGTTGA GGATAATTCT TTAGATTTTG TAAAATCATT AAAGAAGGAA GGGTATAAAC TTGTAGTAAG TTCTCTTCAA GGAAAAAATA ATTTCTTTGA AGAAAATCTT CAAGGAAAAG TTATGATAGC TGTTGGTAAT GAGGGAAATG GTGTCAGTGA TGAAGTATAT GATATTGCAG ACATAAAAGT TAAAATTCCT ATGCCTGGTG AAGCTGAATC TTTAAATGTA GCTGTAGCTA CTTCTATAAT GATATATGAA AAGATAAGAC AATCATTTAA ATAA
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Protein sequence | MLEIESKNNN LFKEIKKLKE KKHRIKSNKY LIEGLRFVEE AIKSKVSIDS IIFTESFKEK NPDLFLKINE NIKLIQMNET LLKQLCSTEN PQGIVGVINM QNKELKSGEL VVLVDKVQDP GNMGTIIRTA HAAGAAGIVM TKGTVDIYND KTLRSTMGSI FYIPIVEDNS LDFVKSLKKE GYKLVVSSLQ GKNNFFEENL QGKVMIAVGN EGNGVSDEVY DIADIKVKIP MPGEAESLNV AVATSIMIYE KIRQSFK
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