| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2140 |
|---|
| Symbol | pheS |
|---|
| ID | 4201609 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2383379 |
|---|
| End bp | 2384398 |
|---|
| Gene Length | 1020 bp |
|---|
| Protein Length | 339 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 638083005 |
|---|
| Product | phenylalanyl-tRNA synthetase subunit alpha |
|---|
| Protein accession | YP_696568 |
|---|
| Protein GI | 110800757 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0016] Phenylalanyl-tRNA synthetase alpha subunit |
|---|
| TIGRFAM ID | [TIGR00468] phenylalanyl-tRNA synthetase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGATA AGTTAAATCA AATTAAAGAA TTAGCTTTAG TAGAAATTAA AGAAGCTAAA
GATAGTACTA CTATTGATAC AATAAGAGTT AAATATCTTG GTAAAAAGGG AGAACTTACA
ACTATATTAA GAGGAATGGG ATCTCTATCT AAAGAGGAGA GACCAATAGT TGGTAAGTTA
GCTAATGAGG TAAGAGAGGT TTTAGAAGCT GAATTAGAGG CTGTAACAAA GGCTGTTAAA
GAAGCTGAAA AACAAGAAAA GCTTAAAAAT GAAGTAATAG ATATTTCAAT GCCTGGTAAA
AAACAAACAA TAGGAAAGAA ACATCCATTA GAGCAAACTT TAGATGAAAT GAAAAAAATA
TTTGTTTCAA TGGGATTTGC TATAGAAGAT GGTCCAGAGG TTGAGAAAGA TTACTATAAC
TTTGAAGCCT TAAACATTCC TAAGAATCAT CCAGCTAGAA GTGAGCAAGA TACATTTTAC
ATAAATGATA ATGTAGTTTT AAGAACTCAA ACTTCTCCAG TTCAAGCTAG AGTAATGGAA
AAACAACAAC CACCAATAAA AATGATCTCA CCTGGTAAGG TATTTAGATC AGATGCTGTT
GATGCTACGC ATTCACCAAT ATTCTACCAA ATGGAAGGTC TAGTTATAGA TAAGGATATA
ACTTTTGCAG ATCTTAAGGG AACTTTAGAG TTATTTGCTA AAAAAATGTT TGGTGATAAA
GTAAAAACTA AGTTTAGACC ACATCATTTC CCATTCACTG AGCCATCAGC TGAAATGGAT
GCTACATGCT TTGTATGTAA CGGAAAAGGA TGTAAAGTAT GTAAGGGAGA AGGTTGGATA
GAAATACTAG GTTGTGGTAT GGTTCACCCT CAAGTTTTAA GAAACTGTGG AATAGACCCA
GAAGTTTATA GTGGATTTGC TTTCGGCTTT GGTGTAGACA GAATGGTTAT GCTTAAGTAT
GGAATAGATG ACATAAGATT ATTATACGAA AGTGATATGA GATTCTTAAA TCAATTCTAG
|
|---|
| Protein sequence | MQDKLNQIKE LALVEIKEAK DSTTIDTIRV KYLGKKGELT TILRGMGSLS KEERPIVGKL
ANEVREVLEA ELEAVTKAVK EAEKQEKLKN EVIDISMPGK KQTIGKKHPL EQTLDEMKKI
FVSMGFAIED GPEVEKDYYN FEALNIPKNH PARSEQDTFY INDNVVLRTQ TSPVQARVME
KQQPPIKMIS PGKVFRSDAV DATHSPIFYQ MEGLVIDKDI TFADLKGTLE LFAKKMFGDK
VKTKFRPHHF PFTEPSAEMD ATCFVCNGKG CKVCKGEGWI EILGCGMVHP QVLRNCGIDP
EVYSGFAFGF GVDRMVMLKY GIDDIRLLYE SDMRFLNQF
|
|---|
| |