| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2136 |
|---|
| Symbol | |
|---|
| ID | 4201046 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2375709 |
|---|
| End bp | 2378060 |
|---|
| Gene Length | 2352 bp |
|---|
| Protein Length | 783 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 638083001 |
|---|
| Product | U32 family peptidase |
|---|
| Protein accession | YP_696564 |
|---|
| Protein GI | 110799078 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0826] Collagenase and related proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGAA TAGAGTTACT AGCACCGGCA GGAAGTATGG AAAGTTTAAT TGCTGCCATA
AACAGAGGTG CTGATGCTAT ATATTTAGGA GGAAGCAAGT TTTCAGCAAG AGCTTATGCT
TCTAACTTTG ATAATGAAAC AATGGAAAAG GCTGTGGATT ATGCCCATAC TTATGGCGTT
AAGGTTTATG TTACAGTAAA TACTTTAATT AAGGAAAATG AGTTTCAAGA AGCAGTAGAT
TACATAGGCG TTTTATATAA AATAGGAGTT GATGCTTTAA TAATACAAGA TGTAGGATTA
GCTAAAAGAA TAAGAGAGGT ATATCCAGAT TTTGAATTAC ACGCTTCAAC TCAAATGAGC
ATACATAATG GAGAAGGAGC ACTTTTCTTT AGAGAAAATG GATTTTTTAG AATTGTTTTA
TCAAGAGAAC TTACTTTAGA TGAAATTAAA TATATTTCAA AGGACTTAGG AATAGAAACT
GAGATATTTG TTCATGGAGC CTTATGTGTT TGCTATTCAG GACAATGTTT AATGAGTAGC
TTAATAGGAG GAAGAAGTGG TAATAGAGGA AGATGTGCTC AAAGTTGTAG ACTTCCATAT
ACACTAATTA GAGAAAAAGA TAAGAAAGAG ACTAAAGGAT TCCTTTTAAG TCCTAAGGAT
ATTTGTACTA TTGAAAATGT AGAGGACTTG ATAAAAACAG GAACTAGCTC TTTAAAGGTT
GAAGGAAGAA TGAAGAGACC TGAGTATGTT GCTGGAGTTA TAGAATCTTA TAGAGAAGCT
ATAGATAATT CTTATAGAAA TATTAAAAAG TCTCAAGAGG GAAATAAGCT TAAACTTAAA
AAGTTATTTA ATAGAGAAGG TTTTTCTACA GCATACATGT ATAAAAATGT TGGGAAAGAT
ATGATGGCTT TTAAAACTCC AAGAAATACA GGAGTTTTAC TTGGAGAAGT TCTAAAAAAT
GGAGAAGTCC TTTTATTAGA TGATCTTTCA TTAAAAGATG GAATAAGAAC TAATGATGAT
GGATTTACTG TAAGTAAAAT ACTTATGGGA AATAGAGAGG TTACTGAAGC TAAAAAGGGG
GATAAGGTAA AAATATTCCC TAAAAAATAT AAAGCTAATG ATAAGCTTTA TAAAACTTCA
GATACTAAGC TTTTAAATGA ATTAAAGACC TCTTATGAAA ATCCATATGA GAGAAAGATA
AACTTAAAGG CTTATATGAA ATTTAAGGTT AATGAACCTA TGGAACTTAC TGTGGAGTAC
AATGGAAATT ACTTTACAAA GACTGGTGAT ATGGTTCAAG TTGCAGTAAA TAGACCTATG
GATAAGGAAA AAGTTGAAAA GAACTTAAAG AAATCTGGAG ATATTCCTTA TGAAATAAGT
GAAATAGAAT ACGTAACTTT TGAAGATGGT TTTGCAGCAG TTTCTTCTAT AAATAATTTA
AGAAGAGAAG TTTTAGAAGA GATAAGAAAT TCTGAGATTA AAAAATACAA AAGAGTTATA
GAAAAACAAA ATAATATAGA ACTTAATGAA AAGAATGGTG AAATGCCAGA GGTTTTAGTT
GTTGTAAATA CTAAGGAACA ATTAAGAGCT TCAATAGATT GTGGAATCAA AAATATTGCT
TTAGATATCT TTGGAAAAAA TCAAGGGCAA CTTAATAAGA ATGCTATAAA AGAATTCAAA
GTTGAAGGAA TTAATCTTTA TATAAAAGCA CCTACAATAA TAAAAGAAGA GTTTGAAACA
ATAAGTAATA TAATAGAAGA GAATCTTAAC TTAATAAAAG GTTTAGTTAC AGCTAATACT
GGAATAATAA ATAGATTTAA GGATAAAACA AATATTATAG GTGATTATAA ACTTAATATA
TTTAATTCTT ATGGTATGAA GTTTTATAAT GAACATATGA TGGGAAGCTG TTTAAGTTTA
GAATTAAATA AAAAAGAGTT AAATAAAATG CTTAAGAAGT ATTCTAAGGG AGCTCAAATC
TTTGTTTATG GAAGACCAGA GGTTATGGTT AGTGAATACT GTCCAATAGG AAGTACCTTT
GGTGGAAAAT GTACTTCAAA AAATTGTGAT AATCAATGTG TAAGTAGTAC ATTTACTTTA
AGAGATAGAA TGAATCAAGA TTTTGTTATA AGAACTGATA TATTCTGTAG ATCACACATA
TACAATACAG TACCTGTTAA CTTAATTCAG GAAATTGATG AAATAAAATC TTTAGGAGTA
AATTCTTTTA GATTAGACTT TGTAGATGAA AATTATGAAG AGGTTAGACA GGTTATTGAA
GCTCTAAATA AGGAAGAAGC TTTAAGATTA AAGGATTATA CTAAAGGTCA CTTTAAAAGA
GGCGTTGAGT AA
|
|---|
| Protein sequence | MERIELLAPA GSMESLIAAI NRGADAIYLG GSKFSARAYA SNFDNETMEK AVDYAHTYGV
KVYVTVNTLI KENEFQEAVD YIGVLYKIGV DALIIQDVGL AKRIREVYPD FELHASTQMS
IHNGEGALFF RENGFFRIVL SRELTLDEIK YISKDLGIET EIFVHGALCV CYSGQCLMSS
LIGGRSGNRG RCAQSCRLPY TLIREKDKKE TKGFLLSPKD ICTIENVEDL IKTGTSSLKV
EGRMKRPEYV AGVIESYREA IDNSYRNIKK SQEGNKLKLK KLFNREGFST AYMYKNVGKD
MMAFKTPRNT GVLLGEVLKN GEVLLLDDLS LKDGIRTNDD GFTVSKILMG NREVTEAKKG
DKVKIFPKKY KANDKLYKTS DTKLLNELKT SYENPYERKI NLKAYMKFKV NEPMELTVEY
NGNYFTKTGD MVQVAVNRPM DKEKVEKNLK KSGDIPYEIS EIEYVTFEDG FAAVSSINNL
RREVLEEIRN SEIKKYKRVI EKQNNIELNE KNGEMPEVLV VVNTKEQLRA SIDCGIKNIA
LDIFGKNQGQ LNKNAIKEFK VEGINLYIKA PTIIKEEFET ISNIIEENLN LIKGLVTANT
GIINRFKDKT NIIGDYKLNI FNSYGMKFYN EHMMGSCLSL ELNKKELNKM LKKYSKGAQI
FVYGRPEVMV SEYCPIGSTF GGKCTSKNCD NQCVSSTFTL RDRMNQDFVI RTDIFCRSHI
YNTVPVNLIQ EIDEIKSLGV NSFRLDFVDE NYEEVRQVIE ALNKEEALRL KDYTKGHFKR
GVE
|
|---|
| |