| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2134 |
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| Symbol | spoVD |
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| ID | 4201446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2370888 |
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| End bp | 2373071 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638082999 |
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| Product | stage V sporulation protein D |
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| Protein accession | YP_696562 |
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| Protein GI | 110799922 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
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| TIGRFAM ID | [TIGR02214] stage V sporulation protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAGCAA AAAAGAAAAA TAAAAAAATT AAACTTAATG AAGGTAGAGT ATTAGCTTTT
TTATTAGCCA TAGTAATATT ATTTTTAGCT TTATCAGGTA GATTGCTTTA CATAAGTATA
TTTAGATCAA AAGATTATAA GGCTATGGCA GAAGAACAAT GGACCAATGA AATACAAATA
GATGCTAGAA GAGGGCGTAT CTTAGATAGA AACAATAGGG AGTTAGCAGT TACTGCAAAC
GTATTTAGAG TAGATTTAGA TTTAATAACC TTAAGAAAAT ATATTGATAA GAAAGATACT
GATAATATTG AAATTGCAAA ATTATTAGCT GAAGCTTTAG AGATGGATGA AGAAAAGGTT
TTATCAAGAA TAGAACTTAC ATATCCATCA GGAAATCCAG CAAACTCTGC TACCTTAATA
AGAAGAATAG AAAAGGAAAA GGCTGATAAG GTTAAAGAGC TAGATATAAA TGGAGTAATA
GTATCAGAGG ATACAAAAAG ATATTATCCT AATGGAGATT TTCTTTCTCA TACTTTAGGA
ACAACTAATG CAGATGGAGA AGGATTAAGT GGATTAGAAC TTTATTATAA TGAAGAACTT
ATGGGAATCC CAGGAGTAAG AGTTAGTGAA GTCTCTGGAA ATAGTACTTC AAATCCTTAT
TCTGAAACAA GTTTTACTCC ACCTGTAGAT GGAAAAGATA TGACTTTGAC AATAGATGAG
AATATACAAT ACTTTGTTGA AAAGGTAGCT GAAGATGCCT TAAAGAAACA TAATGCAGAC
TCAGTAAGCA TTGCAGTTAT GAACCCTAAT AATGGAGAAA TTTTAGGAAT GGTAAATAAA
CCTGGATTTA ATCCTAATAA TCCTTATGAG GGTAGTGAGG CATTTAAGGG GAAAGATGAA
TCAGCAAAAC TACAAAACAT GTGGAGAAAT ACAATTGTTT CAGATGCCTT TGAGCCAGGT
TCAATATTTA AAATAATAAC TTCTATAGCA GCCATAGAGG AAAATATAGC AGGAAAAGAT
GAGGTTTATT ATTGTGATGG TAGTTTAAAT GTAGCAGGGA AAAATATAAA ATGTTGGAAA
CCTGGTGGAC ATGGAGTACA AAATTTTAAC CAAACATTAG AAAATTCATG TAATGTTGCT
TTTATGGAAA TGGGTGCAAA ATTAGGAGCA GAAAAGTTAA ATGAATATAT TAAACTTTTT
GGATTTGGAA CTCAATCAGG AATAGATTTA CCGGGAGAAG CTACAGGAAT AGTTAAAAAT
GTAGAAGATA TAAGTGCTGT GGATTTAGCA ACTATATCCT TTGGACAAAC TAATACAATG
AATGGTATTC AGTTTATGAC AGCCTTAAAT GCTGTTGCAA ATGGAGGAGA TTTAATTCAG
CCTCATATTA TGAAAGAATT AAGTCATAAG GATGATAATG GGACAAAAAT TATAGATGAA
GTTTTTGTGC CTAAAATACA AGAAAATATA GTAGATGAAA AAAGTACTAT GAGAGTTAAA
GAGGCCTTAG AATCTACTGT TTCTAATGGA TCTTCAAAGG ATGCTGGTAT TGAAGGAATA
AAAGTAGCAG GAAAAACTGG TACAGCAGAA AAGGTAGATC CTGAAACAGG TACTTATGGA
GCAGGGTATA TAGCGTCCTT TGCTGGATTT GCACCATATG ATAATCCACA AGTATCTTTA
ATAGTAATAA TAGATAATCC TAAAAATGGA GAACATTTTG GAGGAATTGT TGCAGCTCCT
TTTGCAGGAG AATTATTTAA TAATATATTT AACTATATTT CATTAAATGA AGGGCAATTA
GATGCGAAAG ATGAAAGTGT AATAATCCCT GATTTAAGAG GAGATAAGGT AACTAGTGCT
GAAAAAACTT TAAATGAATT AGGAGTTAAT TGTGTAATTG AAGGGGATGG AACCTTTGTT
ACTTCAGTTA CACCTATACC AGGCTATAAG GTTAAAAAGG GTGATAGTAT AACCTTGTAT
GCTGGAAGTA GATTTGATAG AAATGAAAAG GAAATAGTAG TTCCTGATTT TAGAAAATTA
AATAAGGAAG AGGCAGAAGA AATTTTAAAA TCCTTAGGAT TAAAGGGAGA ATTTGAAGGA
GAAGGTGAAA TTAAGGAACA GAGCATAAGT GCAGGAGAAA TAATAAAAAG TGGAGATAAG
ATTAAGTTTA AATTAGAAGG ATAA
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| Protein sequence | MKAKKKNKKI KLNEGRVLAF LLAIVILFLA LSGRLLYISI FRSKDYKAMA EEQWTNEIQI
DARRGRILDR NNRELAVTAN VFRVDLDLIT LRKYIDKKDT DNIEIAKLLA EALEMDEEKV
LSRIELTYPS GNPANSATLI RRIEKEKADK VKELDINGVI VSEDTKRYYP NGDFLSHTLG
TTNADGEGLS GLELYYNEEL MGIPGVRVSE VSGNSTSNPY SETSFTPPVD GKDMTLTIDE
NIQYFVEKVA EDALKKHNAD SVSIAVMNPN NGEILGMVNK PGFNPNNPYE GSEAFKGKDE
SAKLQNMWRN TIVSDAFEPG SIFKIITSIA AIEENIAGKD EVYYCDGSLN VAGKNIKCWK
PGGHGVQNFN QTLENSCNVA FMEMGAKLGA EKLNEYIKLF GFGTQSGIDL PGEATGIVKN
VEDISAVDLA TISFGQTNTM NGIQFMTALN AVANGGDLIQ PHIMKELSHK DDNGTKIIDE
VFVPKIQENI VDEKSTMRVK EALESTVSNG SSKDAGIEGI KVAGKTGTAE KVDPETGTYG
AGYIASFAGF APYDNPQVSL IVIIDNPKNG EHFGGIVAAP FAGELFNNIF NYISLNEGQL
DAKDESVIIP DLRGDKVTSA EKTLNELGVN CVIEGDGTFV TSVTPIPGYK VKKGDSITLY
AGSRFDRNEK EIVVPDFRKL NKEEAEEILK SLGLKGEFEG EGEIKEQSIS AGEIIKSGDK
IKFKLEG
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