Gene CPF_2131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2131 
Symbol 
ID4203657 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2368450 
End bp2369166 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content25% 
IMG OID638082996 
Productglycerophosphoryl diester phosphodiesterase family protein 
Protein accessionYP_696559 
Protein GI110799759 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTT TTGCACATAG AGGATTTAGT TATAGATATC CAGAAAATAC TTTGTTAGCA 
TTTAAAGAGG CTTTAAAATT AGATATATAT GGAATAGAGC TTGACGTGCA CAAAAGTAAA
GATGGAAAAT TGGTAATAAT ACATGATGAG GATATAAAAA GAACTTTTAA TGGAAATGGA
AAAGTTAAGG ATTATACTTT TGAAGAACTT AGAAGCTTTA AGTGTAATAA AGAAGGCTTT
GAAAATAATG ATGATTGTAA AATCTCCTTA TTAGAAGATG TTTTTAATCT TATAAAAGAT
AAGGATATAG TTTTAAATAT AGAAATTAAA AATGATGTAA TAGATTATGA AAATATTGAG
AAGGATGTAT TAGATTTAAT AAAGGAATAT AATCTAGAAA GAAAAATACT TATTTCAAGT
TTTAATCATA AGGCCTTAGA AAAAGTTAAA AAGTTAAATG TAGATATTAA ATTAGGGGTA
CTTTATGAAA AAGAAATGCC TAATATTCTT GATATTGCTA AAAGTTTAAA TGCATATGCA
ATACACCCTG CTAAATCCCT TGTTTCAGAA GAACTGGTAG AAAAAGCACA TAATGAAGGT
GTAAAAGTCA ATGTTTATAC AGTAAATGAA AAAGAGGATA TAGATAAACT TAAAAATTAT
GGAGTAGATG CTATATTTAC AGATCAGGCT AAAATGGCTT TAGAGTACTT AAAATAA
 
Protein sequence
MKVFAHRGFS YRYPENTLLA FKEALKLDIY GIELDVHKSK DGKLVIIHDE DIKRTFNGNG 
KVKDYTFEEL RSFKCNKEGF ENNDDCKISL LEDVFNLIKD KDIVLNIEIK NDVIDYENIE
KDVLDLIKEY NLERKILISS FNHKALEKVK KLNVDIKLGV LYEKEMPNIL DIAKSLNAYA
IHPAKSLVSE ELVEKAHNEG VKVNVYTVNE KEDIDKLKNY GVDAIFTDQA KMALEYLK