| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2130 |
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| Symbol | |
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| ID | 4201342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2365428 |
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| End bp | 2368226 |
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| Gene Length | 2799 bp |
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| Protein Length | 932 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638082995 |
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| Product | calx-beta domain-containing protein |
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| Protein accession | YP_696558 |
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| Protein GI | 110799472 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3669] Alpha-L-fucosidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.538147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTTA GGGCTATAAA AAGTTTTTTA GCAACTACAA TGGCAATGAC TTTTTTAGTT
AGTATGGGAC AAGGATCTAT ATTAACTAAG GCAAATACTA TAAATAATAT GAAATATGTA
ACAGAAGCAT TTGGAGCAAT TCCAACAGAA GAACAGGTTA GCTATCAAAA AGAGGAACTT
ACAGCATTTA TACACTTTGG TGTGAATACC TTTACAGGAA GAGAGTGGGG AGATGGAACA
GAAAATCCAG AAATTTTTAA CCCTACTAAT TTAGATGCTG ATCAATGGGT AAAAACTTTG
GCAGATGCAG GCTTTGGAAG GGTTATATTA ACTGCAAAAC ATCATGATGG ATTTTGTTTG
TGGGATAGTG CATATACAAA GCATGATGTA GCTAGTAGTC CTTGGAAAAA TGGAAAGGGA
GATGTGGTTA AAGAGGTTTC AGAAGCTTGC GCTAAATATA ATATAAAATT TGGAGTTTAT
TTATCACCAT GGGACCAAAA TTCAGAACAT TATGGAGAAG GTAATGGTGG TGATTATAAT
GAGTTTTACA TGAATCAGCT AAGGGAGTTA TTAACTAACT ATGGACCTAT AGCTGAAGTT
TGGATGGATG GAGCAAAGGG ATCAAATGTT AAGCAAGAAT ATAACTTTGA AGAATGGTTT
GCTCTTATAA AAGAATTACA ACCAGAATGT TTAATATTTA GTCCACAGGG TCCAGATATT
AGATGGATTG GAAATGAAAA AGGATATGCA GGAGAGCCTT GCTGGTCAAC TATAGATATT
GAAAAAATGA AAGAAAGGGA AAATCCAACA TATTTGAATA ATGGAGAAGA AGGTGGATCA
GATTGGGTAG TTGGAGAATC AGATGTATCA ATAAGACCAG GTTGGTTTTA CCATGAATCT
CAAGATAATG AAGTTAAATC CTTAGAAAAA ATGATGGATA TTTATTTTAA ATCCATAGGG
AGAAATTCAG TTTTATTATT AAATGTTCCC CCTAATAAGG AAGGAAAGTT ACATGAAAAT
GATGTTAATA GATTAAAGGA ATTTGGTGAA ACAATTAAAG AGTTATTTAA TGATGATTTA
GCTTTAAATA AAGAGGTAAT AGTAGATAGT TTTGCTAATA GGGATGAGAC ATATGGTGCA
AATAAAATTG TAGATGGAGA TTATGATACC TATTGGGCAC CAGATAATAG TAGTAAAACA
GGTACTATTG AAATAGATCT AGGTGGAAGT AAAGAATTTG ATGTTATTTC TTTGCAAGAG
TATATACCAT TAGGTCAAAG AGTATCTAGT TTTAATATAG AAGTGTTACA AGGAGAAAAT
TGGAATAAGG TTTATGAAGG AAAAACAATA GGATATAAAA GACTTATTAG AATATCCCCA
ACTAAAGGAG AAAAAATAAG AATTAATATA ACTGGTTCAT TAGAAGTGCC ACTTATAAAT
AATGTTGGAG TTTATAAACA ACCTATTAGT ATAGAACTTC CATCAGGGCC ACCAGCTGGA
TTGAAAGTAT TAAATGATGA TAATAAGGGG AATGAATTAG AACAATTTAA CTTTAGTGAT
GGATGGGTAT ATGAGACTAT CCATGGAGAA AATGATTTAG GTGGAGATGC TCACTATACA
AGTAAAACTA ATGCTACAGT TAATATTAAA TTTAATGGAA CTAAGTTTTT CTTATCAGGA
ACAAAGGATT CAGGACATGG AATAATGGAA ATTTCCATAG ACGGTGAAAA TCCAGTAGAG
GTTGACTTAT ATTCTCCTAA TAGAAAATGT AAAGAGATAG TCTTTGAAAG TGAAGATTTA
AGTGATGGAG AGCATGAAGT TACGGTTAAA TGTACTGGAA GAAAGAATTC AAGTTCTAGA
GGGACAGCGG CTCATATAGA TGGAGCTTAT GTATTAGACA ATGGTGGAAA AGGTATGGTT
GAATTTGAAA AGGTAGGATA CGAAGTAAGT GAAAATATAG GAACTGCTAC TTTTAAGGTT
ATAAGAAAAG GCGGAAGTAA TGGTAAGCTT GAAGTTAACT ATGATACTTT AGCTGGCACT
GCTTTAAATG GAGTTGATTA TCAAACATGG TCTGGTACTT TAGCATTTAA TGAAGGTGAA
ACAGAAAAAA CTTTTGATAT AACAATCATT GATGATAAGG AAAAAGAAGA GCCTAAGGAA
TTCTATTTAA AATTAAGTGA TCCAATAGGT GGAATATTAG GATTTAATTC AAGAGCTACA
GTTACTATTA ATGATGATGA GCAAATTAAA ATAGAAACAA AGGATACTGG TGATGGATTA
CATCAATTTA ATTTTTCAGG AGGATGGAAT AAAGAGACTG ATGGAGCATG GACAAACAAT
ATGAATTCAA CTTTCTCTAT CAAGTTTAGA GGAAAGCAAA TTTCTTTAAT AGGAGCAAAG
GATCCTAATC ATGGAATTTA TGAAATTTCA ATAGATGGAG GAGAATTTGT AGAAGTTGAT
GCTTATGCAG AAAGTAGGGT TACAAATCAA GTAATATATG AAAGTGAAGT ATTAACTTCT
GGAGAGCATA TTTTAAACTT TAGATTAAAG GGTGAAAATC CACATGGAGG TAGAGCTGAT
GGTCAATTGA ATTATGCTCT AGTGGATACC AGTGAAGACA ATTTAGTTGA GCCAGAAATG
CCTACAACAG ATTTAAACAA AGATGGCAAA GTTGATATTG GTGACTTATC ATTAGCATCT
AAACATTATG GGGAAAATAT TAAAGAGTAT GATATAAATG GTGATGGAGT TATTGATGAA
TTTGAACTTA ATTCTATAAC GAATGATATA TTAAAATAA
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| Protein sequence | MKVRAIKSFL ATTMAMTFLV SMGQGSILTK ANTINNMKYV TEAFGAIPTE EQVSYQKEEL
TAFIHFGVNT FTGREWGDGT ENPEIFNPTN LDADQWVKTL ADAGFGRVIL TAKHHDGFCL
WDSAYTKHDV ASSPWKNGKG DVVKEVSEAC AKYNIKFGVY LSPWDQNSEH YGEGNGGDYN
EFYMNQLREL LTNYGPIAEV WMDGAKGSNV KQEYNFEEWF ALIKELQPEC LIFSPQGPDI
RWIGNEKGYA GEPCWSTIDI EKMKERENPT YLNNGEEGGS DWVVGESDVS IRPGWFYHES
QDNEVKSLEK MMDIYFKSIG RNSVLLLNVP PNKEGKLHEN DVNRLKEFGE TIKELFNDDL
ALNKEVIVDS FANRDETYGA NKIVDGDYDT YWAPDNSSKT GTIEIDLGGS KEFDVISLQE
YIPLGQRVSS FNIEVLQGEN WNKVYEGKTI GYKRLIRISP TKGEKIRINI TGSLEVPLIN
NVGVYKQPIS IELPSGPPAG LKVLNDDNKG NELEQFNFSD GWVYETIHGE NDLGGDAHYT
SKTNATVNIK FNGTKFFLSG TKDSGHGIME ISIDGENPVE VDLYSPNRKC KEIVFESEDL
SDGEHEVTVK CTGRKNSSSR GTAAHIDGAY VLDNGGKGMV EFEKVGYEVS ENIGTATFKV
IRKGGSNGKL EVNYDTLAGT ALNGVDYQTW SGTLAFNEGE TEKTFDITII DDKEKEEPKE
FYLKLSDPIG GILGFNSRAT VTINDDEQIK IETKDTGDGL HQFNFSGGWN KETDGAWTNN
MNSTFSIKFR GKQISLIGAK DPNHGIYEIS IDGGEFVEVD AYAESRVTNQ VIYESEVLTS
GEHILNFRLK GENPHGGRAD GQLNYALVDT SEDNLVEPEM PTTDLNKDGK VDIGDLSLAS
KHYGENIKEY DINGDGVIDE FELNSITNDI LK
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