Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2126 |
Symbol | |
ID | 4202264 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2356814 |
End bp | 2357911 |
Gene Length | 1098 bp |
Protein Length | 365 aa |
Translation table | 11 |
GC content | 27% |
IMG OID | 638082991 |
Product | TPR domain-containing protein |
Protein accession | YP_696554 |
Protein GI | 110799014 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0000000503657 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTTA ATACATTTGC AAAAGAAAAA TTATCACAAC TTTTATTTTT AGAAATAGAT GGAGATGGAT TTGTTAAAAG CTTAGGAAAA GATCCAAAAG AGGTTAATAT AAATGAAGTT TATATCCCAA TAGATCCAAA ACATTTATCA CAGGATGTGA AAAGTGGATA TAAATTAGAA TCTTTACCAA TAAACTATTT AGTTGAAGGA ATGTTTTTTG CTTTAGGTGG AGACAAGGAT TTTAAATTTA ATAAGGAGTA TAAAAAATTA ATTCCACTAA TAGAGGATGC TATTCCATGT GTTAAAAAGA TAGTAGCTGA TAAGGTTAAA GAAGAAAATA TGGTTGAAGC ATTTATGCTT TTAAAGGGAT TAACTGAAAT ATCAGATGAA ACTGAGGTTT ACGAAAATCT TCTTTTAATA TGTGAATCTT TAAGAGAAAG AAATAAAGCT TACAATGAAA CTCAACTAGA AATTTGTGAT AAATGTAAAG CAAATAGAAG TGATTTAGCT CTTCCATATC TTTATTCAGC AATAGCTTAC AATGACATGG GACAATATGA TAAAGCTTAT GTTGATATAA ATGAATATTT AGCTAAGGGT GGAGAAAGAA ATGAAATAGT TGAGGTTTTA TATAATGAGA TAAAAGACTC AGCTGATTAT GAAGAAGGAA AAGAAGATTT AATAGAAGAA CCAGAGGATG CTTTAAAAAG ACTTCTTCCT TTAGCAGATA AATTCCAAGA TAATGCTATT TTAAGATATT ATATTGCAAC AGCTTATAGA AGACTTGGAA ATTTTGAAAA GGCAGTTTAT TACTTAAATG AATGTTTATC AATTGATGAT AGTATAGTTG AAGCAGTAAA TGAAATGGGA ATAAATTATG CATCTTTAGG AATATATGAT GAAGCTGTTA AATATTTAAG AAAAGCCTTT GAAAGTACAA GAGATATAGA GGTTTGTACT AACTTAATAG TTTGTTATTT AAATGCAGGA AAAATAGAAG AGGCAAAGCA GCATTTAGAT ATAGCAAAGG CTATAAACAA GGATGATGAA ATAGTAAAAG AAATAGAAAC ATTTATGAAA AATAATAATA TTAAATAG
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Protein sequence | MSFNTFAKEK LSQLLFLEID GDGFVKSLGK DPKEVNINEV YIPIDPKHLS QDVKSGYKLE SLPINYLVEG MFFALGGDKD FKFNKEYKKL IPLIEDAIPC VKKIVADKVK EENMVEAFML LKGLTEISDE TEVYENLLLI CESLRERNKA YNETQLEICD KCKANRSDLA LPYLYSAIAY NDMGQYDKAY VDINEYLAKG GERNEIVEVL YNEIKDSADY EEGKEDLIEE PEDALKRLLP LADKFQDNAI LRYYIATAYR RLGNFEKAVY YLNECLSIDD SIVEAVNEMG INYASLGIYD EAVKYLRKAF ESTRDIEVCT NLIVCYLNAG KIEEAKQHLD IAKAINKDDE IVKEIETFMK NNNIK
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