| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2117 |
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| Symbol | spoVD |
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| ID | 4202985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2347513 |
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| End bp | 2349732 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 638082982 |
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| Product | stage V sporulation protein D |
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| Protein accession | YP_696546 |
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| Protein GI | 261876156 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0768] Cell division protein FtsI/penicillin-binding protein 2 |
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| TIGRFAM ID | [TIGR02214] stage V sporulation protein D |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAAAAGA AGAAAAACAA AGGATTTAAA GATTATAAAA TAACAAAATC GCTTAGATTT
GGAAGAACAT ATTGGACCAT GATAGTAGTA TGGGGATTAC TAGGAGTATT AACCTTAAGA
TTATCATACG TAATGATTTT TAAGCATAAA GAATATGGTT CAATGGCAGA AGAACAATGG
AAAAATGAAA TAAAGATAGG TGCTAAAAGA GGAGAAATAC TAGATAGAAA TGGAGCTCAA
TTAGCTGTTA GCGCTAATGT TTATAGAGTG GATTTAGATC TTAAAACTTT AAGAGAAGAT
ACATTTACTA AAGATGATAC AGATGATACA AAAAAAGAAA AGCTTAATAA AATTGCAGGG
GAGCTAGGTA CTGTTTTAGA TATGCCTAAA GAAGAGGTAT ATGATAAGAT AAATAGCACT
TTACCATCAG GATTGCCAGC TACTTCTGTT ACTTTAATTA GAAAGATAGA AAAAGATAAA
GCTGATAGTG CTAAGAATTT AAAGATAAGA GGAGTAATAG TTTCACAGGA TACAAAGAGA
TATTACCCAG ATAATAATTT CTTAGCTCAA GTATTAGGAA GAGTTGATGC AGATGGTATA
GGTCAAGGTG GTATAGAGCG TGAATATAAT GTGGAGTTAT CAGGTTTACC AGGAATGAGA
ATATCAGAAG TTGCAAGAAA TAGTAGTGGA ATACCTTATT CAAATTCTGA ATTTGCAAAG
CCTGTGGATG GTAAAGATGT CACACTAACC GTTGATGAAA CTATACAATA TTTTGCAGAA
AAAGTTGCAG AAGAAGGAAA AAAAGAATAT AAAGCAGATG GGGTTAGTAT AATAGTTATG
AATCCTAAAA ATGGAGAAAT ATTAGCTATG GCTAATAAAC CAGATTATAA TCCTAATGAA
CCTTATAAAG GGTATGAAAA TTTCCCTGGT AAAGATAAAA CTGAAAAGAT GGAAAATATG
TGGAAAAATG ATGCCGTATC AAATTCATTT GAGCCAGGAT CTATATTTAA AATGGTAACA
TCTTCAGCTG CCGTACAAGA AGGGATAGCA GGTGGAAATG AAACATATTT TTGTCCAGGT
GGAAAAAATG TATCTGGAAC TTATATAAAA TGTTGGAAGC CAGATGGGCA TGGAACTGAA
ACTTTTGACC AGATATTAGA AAACTCTTGT AACGTTGGGT TTATGGACAT AGGTCAAAAA
CTTGGAAAAG AAAAATTAAA TGAATATATA GAAAAGTTTG GATTTGGTAA GCAGACAGGA
ATAGATTTAC CTGGAGAAAC AACAGGTATA GTATTGCCAA ATGATAAAAT AGGTCCAGTA
GAACTTGCAA CCATATCATT TGGTCAAACA GATAGTGCTA GTTCAGTTCA AATGATGGCA
GCTATGAACA CAATTGCTAA TGGAGGAACA TGGATACAAC CTCATATAAT GAAGGAAATA
AGCCATGAAG ATACAAGTGG AGCAAGAGTA GTGGATAAAA CTTTTGTACC TAAAAAGATT
GATAATATAA TAGATCAAAA AACAGCTATG AGAGTTTCAG AGGCTCTAGA AAAAACTGTT
CATTTTGGAT CTCCTAAGAG AGCTTATATA GAGGGATATG GAATTGCAGG TAAAACTGGT
ACAGCTGAAA AGGTTAAGGC TAGTGGAGGA TATGGTGCAG GGTATGTAGC GTCCTTTGCT
GGATTTGCTC CATATAATGA TCCACAAGTT TCAGTTTTAA TATCTGTAGA TAATCCAAAG
GGGGAATACT TTGGAGGATT AGTAGCGGCA CCATTAGCTC ATGATTTATT TAGTGATATA
TTTAACTATA TGGAATTAGA TAGTTCAAAG ATAGACAAAA ATAAATCAAA AGAAGAGATT
CTGCCAGAAG TTAGAGGTAT GAGTTTAGAT AAGGCTAAAG CTATTTTAGA TAAAGATAAT
ATAAAATATT CTGTAGAAGA TGGTGGGAAT TCTGTAGTTG ATATGAATCC TAAGCCGGGA
TATACAATCA AAGAGGGAGA TGAAATTAAA CTTTACACTA AAACTACTTC AAATTATAAT
AAAGATGTTG TAGTACCAGA TTTTAATGGA CTTTCCATGG AAAAAGCAAA GGAAATTTTA
AACAAAATTG GCTTAAAGGG TACTTTTGCA GGAGAGGGAG TTATTAAGGA ACAAAGTGTA
GCTCAAGGTG ATGTAGTTAA AAGTGGTACA TCAATAGAAT TTAAATTAGA TAAGAAATAA
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| Protein sequence | MKKKKNKGFK DYKITKSLRF GRTYWTMIVV WGLLGVLTLR LSYVMIFKHK EYGSMAEEQW
KNEIKIGAKR GEILDRNGAQ LAVSANVYRV DLDLKTLRED TFTKDDTDDT KKEKLNKIAG
ELGTVLDMPK EEVYDKINST LPSGLPATSV TLIRKIEKDK ADSAKNLKIR GVIVSQDTKR
YYPDNNFLAQ VLGRVDADGI GQGGIEREYN VELSGLPGMR ISEVARNSSG IPYSNSEFAK
PVDGKDVTLT VDETIQYFAE KVAEEGKKEY KADGVSIIVM NPKNGEILAM ANKPDYNPNE
PYKGYENFPG KDKTEKMENM WKNDAVSNSF EPGSIFKMVT SSAAVQEGIA GGNETYFCPG
GKNVSGTYIK CWKPDGHGTE TFDQILENSC NVGFMDIGQK LGKEKLNEYI EKFGFGKQTG
IDLPGETTGI VLPNDKIGPV ELATISFGQT DSASSVQMMA AMNTIANGGT WIQPHIMKEI
SHEDTSGARV VDKTFVPKKI DNIIDQKTAM RVSEALEKTV HFGSPKRAYI EGYGIAGKTG
TAEKVKASGG YGAGYVASFA GFAPYNDPQV SVLISVDNPK GEYFGGLVAA PLAHDLFSDI
FNYMELDSSK IDKNKSKEEI LPEVRGMSLD KAKAILDKDN IKYSVEDGGN SVVDMNPKPG
YTIKEGDEIK LYTKTTSNYN KDVVVPDFNG LSMEKAKEIL NKIGLKGTFA GEGVIKEQSV
AQGDVVKSGT SIEFKLDKK
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