Gene CPF_2109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2109 
Symbol 
ID4201092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2339688 
End bp2340419 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content28% 
IMG OID638082974 
Producthypothetical protein 
Protein accessionYP_696538 
Protein GI110800822 
COG category[S] Function unknown 
COG ID[COG3879] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0163543 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAAATA GAGAATTTAC TATTTTTATA TTTACAGCTT CCGTTATAGT TGGACTTTTA 
ATATCTATGA ATATAAGTTT TGATGGAATA GAAACTACAA AGGTGTTAAA TGCTAAAGAA
TATCAAGAGG CATATAATAA ACGTAACAAT CTTTATAATG AAATATCAAA GTTAAAGGAA
AATAATAGAG AACTACAAAA GAAGATAAAT AATTATTCAA AGAATGATGA GGATAGCAAT
AAAATTTCAA AGGATATGAT AGAAGAGTTA AATAATAATT TAATGCTTTC TGGATTAGAA
GAGGCTAAAG GACCAGGTTT AAAAATAGTT TTAGAGGATG GTGGAGAAGC TTTTAGTGGA
GAAGTAGTTG ATGATTTCAT GAGACTTTTA AGAACTATTC ATGATGATGA TATGATAAAA
GTTATAAATG AACTTAAAGC TGCAGGCGCA GAGGCAATAT CTATAAATAA CCAAAGAATA
ATATATAATA CAGAGATATA TTGTGGAGGA CAGTTTTTAC GAATGAATGG AGTTAAAATA
CCAGCTCCTT TTTATGTTAA TGTTATAGGT GATCCAGAAA AAATGGAGAA TCAAATTATG
AGAGACGGAA GTTATATTAA AACTCTTATG AATAGAGGAA TAAAGGTTCA AATAACTAAG
AGTGACGACA TAACTATGCC AGCATATATA AGTGATATGA ATTCTAAGTA TATGGAACCT
AATACAAAGT AA
 
Protein sequence
MKNREFTIFI FTASVIVGLL ISMNISFDGI ETTKVLNAKE YQEAYNKRNN LYNEISKLKE 
NNRELQKKIN NYSKNDEDSN KISKDMIEEL NNNLMLSGLE EAKGPGLKIV LEDGGEAFSG
EVVDDFMRLL RTIHDDDMIK VINELKAAGA EAISINNQRI IYNTEIYCGG QFLRMNGVKI
PAPFYVNVIG DPEKMENQIM RDGSYIKTLM NRGIKVQITK SDDITMPAYI SDMNSKYMEP
NTK