| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2100 |
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| Symbol | dapF |
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| ID | 4201532 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2331566 |
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| End bp | 2332384 |
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| Gene Length | 819 bp |
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| Protein Length | 272 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638082965 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_696529 |
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| Protein GI | 110799448 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.312969 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGTTTT CAAAAATGCA TGGAAATGGA AATGATTTTA TAGTTATAGA AGATTTAAAC
AATGAGTATT TAGGTAAAGA GGGAGAAATT GCTCAAAAAA TGTGCCATAG AAGATTTGGA
ATTGGCGCAG ATGGGATTTT AATAGTTAGA AAGAATGAAA ATTGTGATAT AGAAATGGTA
ATAATAAATT CAGATGGATC TTATGCTGCT ATGTGCGGAA ATGGAATAAG ATGTTTTGCT
AAGTATGTCT ACGAGAAGGG AATAGTAAAG AAAGATGTGC TAGATGTTTT AACAGGTGAT
GGAGTTAAAA GAATCTTTTT AGAAATTGAG AATGATAAGG TAAAAAGTAT CAATGTAAAT
ATGGGATTTG GAGACTTTAA ACCAAAGAAT ATTCCAGCAT TATGTGATGA AGAAATAATA
GAAAAAAAAG TAAGTGTAGG AAATGGAAAT TTTGAAATAA CATCTTTACT TATGGGTGTT
CCTCATACTA TTATATTTGA GGAGGAAAAA TATCCTATAG AATGTGGTAG GGATATAGAA
AAGTATGAAT TATTTCCTCA AGGAACAAAT GTTAACTTCT GCAAAGTAAT TGATAGAAAT
ACAATGGAAG TTAGAACTTG GGAAAGAGGT GCAGGCCCAA CCTTAGCATG TGGAACAGGA
AATTGTGCTT CAGTTATAGC TGCTAATAAA TTAGGTCTTG TAGATAAAGA AGTAAAGGTA
ATAGTTCCTG GTGGAGAATT AAAAGTTAAT ATTGAAGATG ATGGAGTAAA AATGATAGGT
AATGCGTCAT TTATTTGTGA TGGCACATAT TTATTTTAG
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| Protein sequence | MKFSKMHGNG NDFIVIEDLN NEYLGKEGEI AQKMCHRRFG IGADGILIVR KNENCDIEMV
IINSDGSYAA MCGNGIRCFA KYVYEKGIVK KDVLDVLTGD GVKRIFLEIE NDKVKSINVN
MGFGDFKPKN IPALCDEEII EKKVSVGNGN FEITSLLMGV PHTIIFEEEK YPIECGRDIE
KYELFPQGTN VNFCKVIDRN TMEVRTWERG AGPTLACGTG NCASVIAANK LGLVDKEVKV
IVPGGELKVN IEDDGVKMIG NASFICDGTY LF
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