| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2098 |
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| Symbol | |
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| ID | 4201002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2329031 |
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| End bp | 2330419 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 27% |
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| IMG OID | 638082963 |
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| Product | putative pilus biogenesis protein |
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| Protein accession | YP_696527 |
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| Protein GI | 110801142 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00233002 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAATATA CCATTAAAGA TATAGATATG AAGCTAATGG AGAATATATC TAAGAATACA
GCTTTAGAGA TGAATTTAAT TGCCTTAAAA GAAAGTTCAG GTAAGATATT TTTTTATACA
AGTAAGGAAG AATCAAAGAA AAGGGAGTAT TTATCCTTAT TATTTAGAGA AAAAGAAATA
AACTTTGTAA TTGGAAATAA GGATGAAATA GAAATTTTAA TTGAAGATTG TTATGGTGGA
AAAAGTTTTT CTAAGGATAA ATTTATTGAG GAAGAATTAA TAAGTCTTAT ATCTTTAGGT
ATAGAAAAAA ATACTAGTGA TATTCATATT GAACCCTTAG AAGAATATGC TAACATTCGC
TTTAGAATAG ATGGAACTTT AGTTTTAGTT AAGAGAATAA AGAAAAATCT TTATGAAAAT
TTAGTCAATA AGATAAAGTT AAAAGCTGAT ATGGATATAA GCGATAAATT AAGATGCCAA
GATGGGAAGG TGTCATTTAA AAATTATGGA TATGATTGTG ACTTAAGAAT ATCAAGTATT
CCAAGTACTT TTGGTGAAAA GTTAGTAGTT AGAATTTTAT ATAAGAAAAA TGAGTTTATG
AATATTGATA ATTTGAGTTT AATGGAAGAT CAAAAGAATA AAATAAATAA ACTTTTAAAA
TTAAAACATG GAATGGTAGT TATAAATGGT CCTACAGGAA GTGGAAAATC AACAACTCTA
TATGCATTAT TAAATTCAAT AGATAAGGAA GGGATAAATA TAAGTACCAT AGAAGATCCC
GTTGAGTTTA CCATAGAAGG AATAACTCAA ACAAATGTTA ATGATAAGGT TGGATTAACC
TTTGCTAATG GATTAAAGCA TATATTAAGA CAGGACCCTG ATGTTATATT AATTGGAGAA
ATAAGAGATG AGGAAACGGC TAAAATTGCC ATAAGAGCTT CTATAACAGG GCATAAAGTA
TATTCAACAA TACACGCTAA CAGTGGTAAT GAAGTTTTTA ATAGATTATT AGATATGGGA
GTAGAAGGAT ATTTAGTAAA GGAAGGAGTA AGTTCAATAA TAACTCAAAG ATTAGTAAGA
AAAATTTGTG AAAAGTGTAA AGTGAAGATA GAGCTTAAAA ATGAACTAGT TGAGAAATTA
AAAGGGGAAG AGTTAAGTTT AAAAGCTTAC TATAAGGGAA CTGGATGTGA AATGTGTAAT
TGGACAGGTA ATAATGGAAG AAAAGCAATT TGTGAAATTA TATTTCCAAG AGAATATAAA
AGTACAGAGG ATATTACTTG GGGAGAAGAA CTATTAAAGG CATGTTTTAC CTTAGTTAAA
AAGGGAGAAA TATCTTTAGA AGAATATTAC TTATTAAAAG AATGTGAGGG GTTAGATGTT
TGGGTTTAA
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| Protein sequence | MKYTIKDIDM KLMENISKNT ALEMNLIALK ESSGKIFFYT SKEESKKREY LSLLFREKEI
NFVIGNKDEI EILIEDCYGG KSFSKDKFIE EELISLISLG IEKNTSDIHI EPLEEYANIR
FRIDGTLVLV KRIKKNLYEN LVNKIKLKAD MDISDKLRCQ DGKVSFKNYG YDCDLRISSI
PSTFGEKLVV RILYKKNEFM NIDNLSLMED QKNKINKLLK LKHGMVVING PTGSGKSTTL
YALLNSIDKE GINISTIEDP VEFTIEGITQ TNVNDKVGLT FANGLKHILR QDPDVILIGE
IRDEETAKIA IRASITGHKV YSTIHANSGN EVFNRLLDMG VEGYLVKEGV SSIITQRLVR
KICEKCKVKI ELKNELVEKL KGEELSLKAY YKGTGCEMCN WTGNNGRKAI CEIIFPREYK
STEDITWGEE LLKACFTLVK KGEISLEEYY LLKECEGLDV WV
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