Gene CPF_2089 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2089 
Symbolefp 
ID4201848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2324186 
End bp2324743 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content35% 
IMG OID638082954 
Productelongation factor P 
Protein accessionYP_696518 
Protein GI110800261 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) 
TIGRFAM ID[TIGR00038] translation elongation factor P 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0137098 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATCAG GAAGTGATTT AAGAAAAGGA ACTACTTTTG AACTGGATGG ACAAGTATAC 
ACAGTTATAG ACTTCTTACA CGTTAAACCA GGAAAAGGTG CTGCTTTCGT TAGAACTAAA
TTAAGAAACG TTATAATGGG TGGTGTTACA GACAGAACTT TCAACCCAAC TGATAAATTA
CAAGAAGCTA TAATCGAAAG AAAAGAAATG CAATACCTTT ACTCAGATGG AGAATTATAC
TACTTCATGG ATCAAGAAAC TTTCGAGCAA ATTCCTTTAA ACCATGAAAA AGTTGAAGAT
GCTATAAAAT TCTTAAAAGA AAACATGAAC GCTGTAATCA AATTCTACAA AGGAGAAGCT
TTCTCAGTAG AAGCTCCAAA CTTTGTTGAG TTATTAATCA CTGAGTGTGA GCCAAGTGTT
AAAGGAAACA CTGCTACTAC AGCTATGAAA ACTGCAGTTG TTGAAACTGG TGCAACAGTT
ATGGTTCCTA TGTTCGTTGA AGAAGGAAAC ACTATAAGAA TAGATACTAG AACTGGCGAG
TACATGGAAA GAGTTTAA
 
Protein sequence
MISGSDLRKG TTFELDGQVY TVIDFLHVKP GKGAAFVRTK LRNVIMGGVT DRTFNPTDKL 
QEAIIERKEM QYLYSDGELY YFMDQETFEQ IPLNHEKVED AIKFLKENMN AVIKFYKGEA
FSVEAPNFVE LLITECEPSV KGNTATTAMK TAVVETGATV MVPMFVEEGN TIRIDTRTGE
YMERV