Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2089 |
Symbol | efp |
ID | 4201848 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2324186 |
End bp | 2324743 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 638082954 |
Product | elongation factor P |
Protein accession | YP_696518 |
Protein GI | 110800261 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A) |
TIGRFAM ID | [TIGR00038] translation elongation factor P |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0137098 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATCAG GAAGTGATTT AAGAAAAGGA ACTACTTTTG AACTGGATGG ACAAGTATAC ACAGTTATAG ACTTCTTACA CGTTAAACCA GGAAAAGGTG CTGCTTTCGT TAGAACTAAA TTAAGAAACG TTATAATGGG TGGTGTTACA GACAGAACTT TCAACCCAAC TGATAAATTA CAAGAAGCTA TAATCGAAAG AAAAGAAATG CAATACCTTT ACTCAGATGG AGAATTATAC TACTTCATGG ATCAAGAAAC TTTCGAGCAA ATTCCTTTAA ACCATGAAAA AGTTGAAGAT GCTATAAAAT TCTTAAAAGA AAACATGAAC GCTGTAATCA AATTCTACAA AGGAGAAGCT TTCTCAGTAG AAGCTCCAAA CTTTGTTGAG TTATTAATCA CTGAGTGTGA GCCAAGTGTT AAAGGAAACA CTGCTACTAC AGCTATGAAA ACTGCAGTTG TTGAAACTGG TGCAACAGTT ATGGTTCCTA TGTTCGTTGA AGAAGGAAAC ACTATAAGAA TAGATACTAG AACTGGCGAG TACATGGAAA GAGTTTAA
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Protein sequence | MISGSDLRKG TTFELDGQVY TVIDFLHVKP GKGAAFVRTK LRNVIMGGVT DRTFNPTDKL QEAIIERKEM QYLYSDGELY YFMDQETFEQ IPLNHEKVED AIKFLKENMN AVIKFYKGEA FSVEAPNFVE LLITECEPSV KGNTATTAMK TAVVETGATV MVPMFVEEGN TIRIDTRTGE YMERV
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