| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2078 |
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| Symbol | nusB |
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| ID | 4201027 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2317328 |
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| End bp | 2317735 |
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| Gene Length | 408 bp |
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| Protein Length | 135 aa |
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| Translation table | 11 |
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| GC content | 25% |
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| IMG OID | 638082943 |
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| Product | transcription antitermination protein NusB |
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| Protein accession | YP_696507 |
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| Protein GI | 110801167 |
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| COG category | [K] Transcription |
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| COG ID | [COG0781] Transcription termination factor |
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| TIGRFAM ID | [TIGR01951] transcription antitermination factor NusB |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00119189 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAGAG TAAAATCAAG AGAATATTTA TTACAATTAG CTTACCAAAT GGAAATAACT
TCAGAAACTG CATTAGAAAC TTTCAATTCT TTTATGGAGA ACGAGGACAT TTCTAAGGAT
GATTTAGATC TAGCATACAT AAAATCAGGA TTATTAGGAA TAGAAGAAAA TAAGGAAAAG
TTAGATTCTT TAATAGAAAG TCAACTTGTA AAATGGAAAT TAAACAGAAT TTCAAAGGTT
AACTTATCAA TTTTAAGAAT TTCTACATAT GAAATATTAT TTGCAGAGGA TGTACCAGGA
AAGGTATCAA TAAATGAAGC TATTGAATTA TGTAAAAAAT ATTCAGATAA TAAATCAGTT
TCATTTATAA ATGGAGTTTT AGATAAAGTA TATAAGAATA TGCAATAG
|
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| Protein sequence | MNRVKSREYL LQLAYQMEIT SETALETFNS FMENEDISKD DLDLAYIKSG LLGIEENKEK
LDSLIESQLV KWKLNRISKV NLSILRISTY EILFAEDVPG KVSINEAIEL CKKYSDNKSV
SFINGVLDKV YKNMQ
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