Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2068 |
Symbol | |
ID | 4201670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2306987 |
End bp | 2308147 |
Gene Length | 1161 bp |
Protein Length | 386 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638082933 |
Product | stage IV sporulation protein B |
Protein accession | YP_696497 |
Protein GI | 110800995 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02860] stage IV sporulation protein B |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAATA TGAACAAAAG AATAAAGATT ATATCAATAA TAATGATGTC TTTAATATTA CTTTTATCCT CTGTAACATT TGCAAGGGAT TATTGTGAGA GTAATAATGT TTTTGCAAGT AGCAATTTCT ATTCTTTAAA TTCTAAGAGT AGTAATGATG AAAAGTTTAA GAACAGATAT GGCGTAGCTC TTGTAAATAG TGAACAGGAA AAGAAAGATA TAGAGCTTTA TGCTGGAGGA AATTCAGTAG GTGTAAGGGT TTCAACAGAT GGTGTATTAG CAGTAGGTTA TTCAGACTTA ACAACAGGAG AAGGAGAAGT AGAGAGTCCA GCTCAAAATG GTGGAATACA AATTGGTGAT AGACTTATAA GTGTAAATGG AAATAAAATA AAAAATTCAA AAGATTTATC AAAAAAAATC AACGAGAGTA AATCAGAAAA TGTTGAAATA TTAATTGAGA GAAATGGTGA AGAAATAACT AAAAATATAA ATTTATCAAA AAATGCAGAT GGTGATTATA AAATAGGTCT TTGGGTAAGA GATTCTACTG CTGGTGTAGG TACACTTACT TTCTATGATA AAGAAAGTGG AAAATATGGA GCAATAGGTC ATCCAATAAC AGATAGTGAA ACAGAAAAAA TTCTTTCAAT AAAAAATGGA GATCTTTTAA ATTCTTCAAT AATAAGCATA AAAAAAGGTG TTAAAGGTAA TCCAGGAGAA TTAAGAGGAA TTTTTTCAAG TGATAAGAAA CCAATAGGAA ATGTTACAGG AAATACACAA TGTGGAATAT TTGGTAGCAT GAATACAGAA AATTTAAAAA ATATTAATAA TAAAACTTAT AAAGTTGGTT GGAGAGATGA AATTCAGCCA GGACCAGCAC AAATTATAAC TACTATTGAT GAAGAAGGTC CTAAGCTTTA TGATATTGAA ATTGTAAAAC TTGCAAAGCA AGATAGCATT AGTACAAAGA GTATGGTAAT TAAGATTACA GATGAAAGAT TATTAGAAAA AACTGGTGGT GTTGTCCAAG GAATGAGTGG AAGTCCAATT ATACAAAATG ATAAAATAAT TGGTGCTGTG ACACATGTTT TGGTTAATAA ACCTGAAGTA GGATATGGAA TTTATATAGA GTGGATGTTA AAAGATGCAA AAATTATATA A
|
Protein sequence | MKNMNKRIKI ISIIMMSLIL LLSSVTFARD YCESNNVFAS SNFYSLNSKS SNDEKFKNRY GVALVNSEQE KKDIELYAGG NSVGVRVSTD GVLAVGYSDL TTGEGEVESP AQNGGIQIGD RLISVNGNKI KNSKDLSKKI NESKSENVEI LIERNGEEIT KNINLSKNAD GDYKIGLWVR DSTAGVGTLT FYDKESGKYG AIGHPITDSE TEKILSIKNG DLLNSSIISI KKGVKGNPGE LRGIFSSDKK PIGNVTGNTQ CGIFGSMNTE NLKNINNKTY KVGWRDEIQP GPAQIITTID EEGPKLYDIE IVKLAKQDSI STKSMVIKIT DERLLEKTGG VVQGMSGSPI IQNDKIIGAV THVLVNKPEV GYGIYIEWML KDAKII
|
| |