| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2065 |
|---|
| Symbol | |
|---|
| ID | 4203030 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2305009 |
|---|
| End bp | 2305539 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 28% |
|---|
| IMG OID | 638082930 |
|---|
| Product | NUDIX family hydrolase |
|---|
| Protein accession | YP_696494 |
|---|
| Protein GI | 110801434 |
|---|
| COG category | [L] Replication, recombination and repair
[R] General function prediction only |
|---|
| COG ID | [COG0494] NTP pyrophosphohydrolases including oxidative damage repair enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.862102 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTTAT ATGAAAAAAC TTTAAATGAG GAGAGCATAT TTAAGTGTTC TTTTATGGAA
CTTGTTAAGC AAAAGGTGAA ATTACCAGAT GGCAATGAGG CAGAAAGAGA TATTGTTAAA
CATTCAAATG GGGTTTGTGT TATAGCTTTC AATGAAAAAG GAAATATTCT TATGGTAGAA
CAGTTTAGAA AGCCTTTTAA TAGAGTGTTT TTAGAATTAC CAGCAGGAAA GGTTGATAAG
GAAGAAATAT TAGAAAAAGC AGCCTTAAGA GAACTTAAAG AAGAGACAGG ATATTTCGCT
AATAAGATAA CATATTTAGG ACAAATAGCA CCATCACCAG GATTTTGTGA TGAAGTAGTT
CATATATATA AAGCTCATGA ACTTAAAAAG GGAGAAACTA ATTTTGATCA TGATGAATTT
TTAAATTTAA ATGAATATTC CTTAGAGGAA GTTAAAAATA TGATTATAGA AGGAAAAATA
ACTGATGCAA AAACTATAGC ATGTTTATTT TTCTATGAAA ATATTAAATA A
|
|---|
| Protein sequence | MDLYEKTLNE ESIFKCSFME LVKQKVKLPD GNEAERDIVK HSNGVCVIAF NEKGNILMVE
QFRKPFNRVF LELPAGKVDK EEILEKAALR ELKEETGYFA NKITYLGQIA PSPGFCDEVV
HIYKAHELKK GETNFDHDEF LNLNEYSLEE VKNMIIEGKI TDAKTIACLF FYENIK
|
|---|
| |