| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2063 |
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| Symbol | xerD |
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| ID | 4202821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2303333 |
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| End bp | 2304205 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638082928 |
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| Product | tyrosine recombinase XerD |
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| Protein accession | YP_696492 |
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| Protein GI | 110799101 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | [TIGR02225] tyrosine recombinase XerD |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGATT TAGTAAGCAA ATACGAAGTA TATCTAGAAT CAATAGGCAA GAGAAAGAAT
ACCGTAAGTG CATACATTAC AGATGTCTCT ATGTATTTAG ATTTTGTAGA GGAAAAAGGG
TTTAAGGTAA GTGAGGATTC ATATCCTTTA ATATCTTATG TACAACATCT AAAAGAGAGC
CACAAGTCTC CATCATCAAT TCAAAGAACA ATCATCTCTT TAAGAAATTT TTATAATTTC
TTAGTAGCAG AAGAATTTTT AAAGAAGGTT CCAAATTTAA CTATGAAAAA AGAAAGAGTT
GAAAAGAAAA AACCTTTAGT TTTAACTGTT GAAGAGATAA ATAAAATAAT GAACTCTACT
AATGTTTTAA CTGAAAAGGG AATACGCGAT AAGGCTTTAT TAGAACTTAT GTATGCTACT
GGAATGAAAG TTTCAGAGTT AATATCTTTA AGAATTGAAG ATATTAATTT GGATTCATCT
TTTGTAAATT GTAGAGATAG TAGAGGGTAT GAGAGACTTA TACCAATAGG AAAAGCAGCT
AAGGAATCTC TTAAAAGATA TATTGTGGTA AGAGAAGATA ATTCTAAAGG ATCAGATAAG
CTTTTCTTAA ATATGAGTGG AGAACCTATA ACTAGGCAAG GAGTTTGGAG AATTGTTAAG
GAGTATGCTG TTATTGCAAA TATTGGTAAG GATATAAATT TAAATACCTT TAGACATTCT
TTTGCAGTGC ATTTATTACA AAACGGAGCA AATGCTAAGG TGGTACAAGA ACTATTAGGA
AATCAAGTTA TGACTTATAT AGATATGTAC TATGATATTA TAAACAATGA AAAAATTAAC
AATATATACA GAAAGGCTCA TCCAAGAGCA TAA
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| Protein sequence | MKDLVSKYEV YLESIGKRKN TVSAYITDVS MYLDFVEEKG FKVSEDSYPL ISYVQHLKES
HKSPSSIQRT IISLRNFYNF LVAEEFLKKV PNLTMKKERV EKKKPLVLTV EEINKIMNST
NVLTEKGIRD KALLELMYAT GMKVSELISL RIEDINLDSS FVNCRDSRGY ERLIPIGKAA
KESLKRYIVV REDNSKGSDK LFLNMSGEPI TRQGVWRIVK EYAVIANIGK DINLNTFRHS
FAVHLLQNGA NAKVVQELLG NQVMTYIDMY YDIINNEKIN NIYRKAHPRA
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