Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2061 |
Symbol | dacF |
ID | 4202634 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2300325 |
End bp | 2301533 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 638082926 |
Product | D-alanyl-D-alanine carboxypeptidase |
Protein accession | YP_696490 |
Protein GI | 110799537 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.884136 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAT ACATAAGAAA AATAGCAGCT TTTGCAATAT TTTTATCTTT ATTTAGCATT GTTTCTTCTG TTCCTGTAAA AGCTGAAGAG GCAATAGAAG TAGAAGCAAG ATCAGCTCTT CTTATGGAAG CTAGTACAGG AAAAATAATT TATGAAAAAA ATGCTAATGA AAAATTTGCA CCTGCTTCAG TAACAAAGAT TATGACAATG TTACTTGCCA TGGAAAAAGT AGATAGAGGA GAAATAAAAC TTTCAGATCA AATCACAGTA AGTGAGACTG CTAAGAAAAT GGGTGGTAGT ACTATGCTCC TAGATGTTGG AGAAGTAAGA ACTGTTGAGG AGATTATAAA AGGTATAGGA ATAGCTTCAG GTAATGATGC CGCTGTAGCT ATGGCTGAAT ATTTAGGTGG AAGTGAAAGT GGTTTTGTTG AGATGATGAA CAAAAGAGCT AAGGAGCTTG GAATGAAAAA CACTACATTT AAAAACTGCA CAGGGCTTCC TATAGAAGGA CATTTATCTA CTGCATATGA TATTTCTATT ATGTCTAGGG AATTATTAAA ACATCCTACT ATATTAAAAT ATACAGGAAC TTATATGGAA ACTATATCAG AGGGAAGAAA ATCTCCTATT GAACTTGTTA ACCATAATAA ATTAGTTAGA TTCTTTAAGG GATGTGATGG TCTTAAAACT GGATTTACTA ATGACGCTAA ATACTGTATA TCAGCTACAG CAACTAGGGA CGGAGTTAGA ATGCTTTCAG TAATAATGGG AGCTCCAACA TTTAAAATAA GAAATAGAGA TGCTAGTATG CTTATGAATT ATGGATTTTC TAAGTTTGAA AGCAAGCAAG TAGCTACAAA AGATGGTGAG GTAGAACAAA TTCCTATGAG TCAAACAGGA GATAAGTTTA TCATAGGAAA AGCTAAGGAT GATTTAACTT TAGTTTGTCC AAAGGGTATG AGTGACAAAA TAGAGAAAAA AGTTGTTTTA GATGAAAGTA AGAAAAAAAT TAAAGAATTT GATACTATAG GATATTGTGA ATATTATCTA GATGGTGAAC TTCTAGGTAA AGTTGAATTA TATTCAGATA GAGATATGAA AAAAGGCGGA ATTATTGATA GTGTTAAATT CAAGGTTAAG AATTTCTTTA ATGGTGAAGA GGAAGATAAA GTAGAAGAAA AAACAGAAGA AAAGAGTAAT GAAAAATAA
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Protein sequence | MKKYIRKIAA FAIFLSLFSI VSSVPVKAEE AIEVEARSAL LMEASTGKII YEKNANEKFA PASVTKIMTM LLAMEKVDRG EIKLSDQITV SETAKKMGGS TMLLDVGEVR TVEEIIKGIG IASGNDAAVA MAEYLGGSES GFVEMMNKRA KELGMKNTTF KNCTGLPIEG HLSTAYDISI MSRELLKHPT ILKYTGTYME TISEGRKSPI ELVNHNKLVR FFKGCDGLKT GFTNDAKYCI SATATRDGVR MLSVIMGAPT FKIRNRDASM LMNYGFSKFE SKQVATKDGE VEQIPMSQTG DKFIIGKAKD DLTLVCPKGM SDKIEKKVVL DESKKKIKEF DTIGYCEYYL DGELLGKVEL YSDRDMKKGG IIDSVKFKVK NFFNGEEEDK VEEKTEEKSN EK
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