| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2046 |
|---|
| Symbol | |
|---|
| ID | 4202071 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2285250 |
|---|
| End bp | 2286263 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 638082911 |
|---|
| Product | putative molybdenum cofactor biosynthesis protein |
|---|
| Protein accession | YP_696475 |
|---|
| Protein GI | 110799247 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0303] Molybdopterin biosynthesis enzyme |
|---|
| TIGRFAM ID | [TIGR00177] molybdenum cofactor synthesis domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACAAA TAAGAGTTGA AGATGCTGTT GGAACAATAT TATCTCATGA TGTAACTCAA
ATAATACCAG GTAAATTTAA AGGAAGAGCC TTTAAAAAGG GCCATGTTAT AAGAGAAGAA
GATATAGAAA AACTTTTATC AATAGGAAAA GAACATGTTT ATGTATGGGA AAAAGAAGAG
GGAATGCTTC ATGAAAATGA GGCTGCTGAA AGATTAAAGG ACCTAGTTTG TGGAGAAGGA
TTAAGTTTTG GAGAAATAAA AGAAGGAAAA ATAGAATTTT TAGCTGATAA AGACGGACTT
TTAAAAATAG ATAAGGAAAA ATTATTAGAA TTAAATATGC TAGGTGAAAT AATAGTTTCT
ACAATTCATG GGAATTTTCC AGTTAAAAAA GGTGATAAGG TAGGGGCTAC TAGAGTAATT
CCACTAGTTA TAGATGAAAA TAAAATAATA GAAGCAGAAA ATCTTATAAA AGATAAGATT
ATAGAAGTTA AAGAGATAAA AAATAAAAAG ACTTTTGCAA TAACTACAGG AAATGAAGTT
TATAGTGGAA GAATAAAAGA TGCCTTTGGT CCTGTTCTTA AGGAAAAGCT TAAGGAATTT
AATATAGATC TTGAAAGACA GGTTATTCTT CCAGATGATA AGGAGAAAAT TATAGAGGAA
ATAAAAAGAG CTTTAGATGA AGGTGCAGAA CTTATACTTT GTACAGGGGG AATGTCAGTT
GATCCAGACG ATGTTACTCC TACAGCTATA AAGGAATGTG GAGGAGAATT AATAACATAT
GGTTCACCTG TACTTCCAGG AGCTATGCTT CTTTTAGCTT ATTATAATGA TGTTCCTATT
ATTGGAATAC CAAGCTGTGC CATGTATTCA AAAAGAACAG CTTTAGATTT AGTCCTTCCA
AGAGTTTTAG CAGATGAAAG ATTAACTTTA AGAGATATAG CTGAATATGG TCATGGTGGA
CTTTGTTTAA ATTGCCCAGT TTGTACTTTT CCACATTGTT CCTTTGGAAA GTAA
|
|---|
| Protein sequence | MKQIRVEDAV GTILSHDVTQ IIPGKFKGRA FKKGHVIREE DIEKLLSIGK EHVYVWEKEE
GMLHENEAAE RLKDLVCGEG LSFGEIKEGK IEFLADKDGL LKIDKEKLLE LNMLGEIIVS
TIHGNFPVKK GDKVGATRVI PLVIDENKII EAENLIKDKI IEVKEIKNKK TFAITTGNEV
YSGRIKDAFG PVLKEKLKEF NIDLERQVIL PDDKEKIIEE IKRALDEGAE LILCTGGMSV
DPDDVTPTAI KECGGELITY GSPVLPGAML LLAYYNDVPI IGIPSCAMYS KRTALDLVLP
RVLADERLTL RDIAEYGHGG LCLNCPVCTF PHCSFGK
|
|---|
| |