| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_2043 |
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| Symbol | |
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| ID | 4202148 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2282660 |
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| End bp | 2283529 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 26% |
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| IMG OID | 638082908 |
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| Product | GGDEF domain-containing protein |
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| Protein accession | YP_696472 |
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| Protein GI | 110800306 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTATAT TAAAGAACTT TTATGATGAA GTTAGAGTGG TAGATCCTAT AAATAATATA
GTATTTTCAG ATGACTTTAA CCTAAAAATC AATAATAAAT TTAATGAAAA AGATTGTTCA
CTAAGCAATT GTTATGATGT GTGGGGAAAA AAATCAATAT GTAGTACTTG CATATCAAAA
AAAGCTTATT TAAAAAATGA TACTTTTATA AAGTTAGAAT ATAATAAAAA TCATGTGTTT
TTAGTTATAG CTTCCCCAAT TGAATTTAAT GAAAATAAAT ATGTTGTTGA AATATTAAAA
GATATAACTA ATAATGGCAG TATAGTAGAT GGTAGTGGAG AAGGTAATTA TTTAGACTTA
ACAATGAAAA AGATGGGAGA AAATCTTATT AAGGATTATT TAACTGGAGT CTATAATAAA
AGGTATATAG ATCAGAGATT TTCAAAGGAA GCTCATAGAA ACTTAAAAGA ATCTATACCT
ACAACTGTAA TTATGACTGA TATAGATTCC TTTAAAAAAG TAAATGATAC CTATGGTCAT
TTAGTAGGTG ACAAAATTTT AAGGGGTTTT GCAAAGGTAT TAAATAATAA TATCAGAGAA
AATAGTGACT GGATTGGTAG ATATGGAGGA GAAGAATTCA TAATTGTTTT AAATAATACC
AATTTGAAAA ATGGAGTGAA GGTTGCTGAG AAGCTTAGAA AAATCATAGA AAAAATGAGC
TTTGACTATG GTGATTTAAG TTTAAAAATA ACTTCTAGCT TCGGAGTTTG TGAAGTTTCA
GAAAAAGAAG ATCCTTTTGA TACCATAAAA AATGCTGATG AAAAATTATA TATGGCAAAA
ATGACAGGAA GAAATAAAAC TGTATTTTAG
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| Protein sequence | MSILKNFYDE VRVVDPINNI VFSDDFNLKI NNKFNEKDCS LSNCYDVWGK KSICSTCISK
KAYLKNDTFI KLEYNKNHVF LVIASPIEFN ENKYVVEILK DITNNGSIVD GSGEGNYLDL
TMKKMGENLI KDYLTGVYNK RYIDQRFSKE AHRNLKESIP TTVIMTDIDS FKKVNDTYGH
LVGDKILRGF AKVLNNNIRE NSDWIGRYGG EEFIIVLNNT NLKNGVKVAE KLRKIIEKMS
FDYGDLSLKI TSSFGVCEVS EKEDPFDTIK NADEKLYMAK MTGRNKTVF
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