Gene CPF_2027 details

Gene Information

• Locus tag: CPF_2027
• Symbol: typA
• ID: 4202703
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 2267657
• End bp: 2269489
• Gene Length: 1833 bp
• Protein Length: 610 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 638082896
• Product: GTP-binding protein TypA
• Protein accession: YP_696460
• Protein GI: 110798655
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 36
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGTAACG AATTTACAAG AAATGATATT AGAAATATAG CTATAATCGC TCACGTTGAC 
CATGGTAAAA CAACTTTAGT GGACGCATTA TTAAGACAAA GTAACGTTTT TAGAACAAAC 
GAAAAAGTAG AAGAGAGAGT AATGGACTCA AATGACTTAG AAAAAGAAAG AGGTATTACA 
ATACTTTCAA AAAATACAGC AGTTCATTAT AACGGAGTTA AAATAAATAT AATAGATACA 
CCAGGACACG CTGACTTCGG AGGAGAGGTT GAACGTGTAC TTAAAATGGT AGAAAGTGTT 
TTACTTGTAG TAGACTCATA TGAAGGGGCT ATGCCTCAAA CAAAATTCGT TTTAAGAAAA 
GCTCTTGAGT TAGGATTAAA ACCAATAGTT GTTATAAACA AAATAGATAA ACCAGATGCT 
AGACCAGAAG AAGTTATTGA TGAAATATTT GAATTATTCT TAGAGCTTGG TGCAGATGAT 
GAGCAATTAG ATTTCCCAAT AGTTTATGCT TCAGCTAGAG ATGGAGTAGC TACAATTAAC 
ATAGATGAGC CAAAAGATAA CATGAAAGAT TTATTCGATA CTATAATCGA AAAAGTTGAA 
TCACCAAAGG GATCTATAGA AGACAGTTTA CAAATGTTAG TTACAACTTT AGATTCAAGT 
GAATATGTTG GTAAAATAGC TATAGGTAAA ATAACTAGAG GAATAGCTAA GAAAAACCAA 
CAAGCTGCTG TTGTAAGACA AGATGGAACA GTAACTAAAT TCAAAATATC AAGTCTTTAT 
ACTCATGATG GATTAAAGAG AATAGAGGTT GATGAAGCTC AATTAGGAGA TATAGTTGCA 
ATAAGTGGTA TATCTGACGT AAATATTGGA GAAACTATAA CAGATGCACA AAATCCAGAA 
GGATTACCAT TTGTTAAAAT AGACGAGCCT ACATTAAACA TGAACTTTAT GGTTAATGAC 
TCACCATTTG CTGGTAGAGA AGGGGATTTC GTAACTTCAA GACATTTAAG AGATAGATTA 
TTAAAAGAAT TAGAAACTAA CGTAAGTTTA AAAGTTAAAG AAATAACTCC AGATTGTTTC 
GAAGTAAGTG GTAGAGGAGA GCTACATCTT TCAATACTTA TAGAAACAAT GAGAAGAGAA 
GGATATGAAT TCCAAGTTTC TAAGCCAAAC GTTATAACAA AAATAGATGA AAATGGTGTT 
AAGGTTGAAC CAATAGAGCA CTTAACTATA GACGTTCCAG AAGAATTTAT GGGACCTGTT 
ATGGAAAAAT TAGGACCTAG AAAAGCTGAA ATGGTAAATA TGACTTCAGC GGTTAATGGA 
TACTCAAGAT TAGAGTTCAA AATACCTGCA AGAGGACTTA TAGGATTTAG AAATGAATTC 
ATGACAGATA CAAAAGGTAA CGGAATAATG AACCATGTAT TTGATGGATT TGAAAAATAC 
AAAGGAGAGA TCCCAGGAAG AAGTAGAGGA TCAATCGTAG TATTTGAATC AGGAGAAGCA 
GTTACATATG GATTATTTAA TGCTCAAGAA AGAGGAACTT TATTCATAGA GCCAGGTACA 
GAGGTTTATG CTGGAATGGT TTGTGGAGAA TGTTCAAGAG CAGATGACAT AGACGTTAAT 
ATTTGTAAGA AAAAACAATT AACTAATACA AGATCATCTG GAGCTGATGA TGCTTTAAAA 
TTAACTCCAG TAAGACAAAT GTCATTAGAG CAATGTTTAG AATTCATAAA CAATGATGAA 
TTAGTTGAAG TTACTCCAGT AAATGTAAGA ATGAGAAAGA GAATCTTAGA CAGTGCTGAG 
AGAAAGAGAG CTATAAATAG AAGTAAAAAA TAA 

 

Protein sequence

MSNEFTRNDI RNIAIIAHVD HGKTTLVDAL LRQSNVFRTN EKVEERVMDS NDLEKERGIT 
ILSKNTAVHY NGVKINIIDT PGHADFGGEV ERVLKMVESV LLVVDSYEGA MPQTKFVLRK 
ALELGLKPIV VINKIDKPDA RPEEVIDEIF ELFLELGADD EQLDFPIVYA SARDGVATIN 
IDEPKDNMKD LFDTIIEKVE SPKGSIEDSL QMLVTTLDSS EYVGKIAIGK ITRGIAKKNQ 
QAAVVRQDGT VTKFKISSLY THDGLKRIEV DEAQLGDIVA ISGISDVNIG ETITDAQNPE 
GLPFVKIDEP TLNMNFMVND SPFAGREGDF VTSRHLRDRL LKELETNVSL KVKEITPDCF 
EVSGRGELHL SILIETMRRE GYEFQVSKPN VITKIDENGV KVEPIEHLTI DVPEEFMGPV 
MEKLGPRKAE MVNMTSAVNG YSRLEFKIPA RGLIGFRNEF MTDTKGNGIM NHVFDGFEKY 
KGEIPGRSRG SIVVFESGEA VTYGLFNAQE RGTLFIEPGT EVYAGMVCGE CSRADDIDVN 
ICKKKQLTNT RSSGADDALK LTPVRQMSLE QCLEFINNDE LVEVTPVNVR MRKRILDSAE 
RKRAINRSKK