Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_2014 |
Symbol | sigG |
ID | 4203644 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2254933 |
End bp | 2255706 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638082883 |
Product | sporulation sigma factor SigG |
Protein accession | YP_696447 |
Protein GI | 110799379 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02850] RNA polymerase sigma-G factor [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGATAA ATAAAGTAGA AATATGTGGA GTCAATACAG CTAAATTACC AGTTTTAAAA GAAAAAGAAA TGAAAGAATT ATTGCTACAA ATGCAAAATG GAGATACAAG TGCTAGAGAG AAATTTATTA AGGGGAATCT GAGATTAGTG CTTAGTGTAA TCCAAAGGTT TAATAATAGA GGCGAAAATG TAGATGATTT ATTTCAAGTT GGTTGTATAG GACTTATGAA ATCTATAGAT AACTTTGATT TATCACAAAA TGTTAAATTT TCAACTTATG CTGTGCCAAT GATAATAGGA GAAATAAGAA GATATTTAAG AGATAATAAC ACTATAAGAG TAAGTAGATC TTTAAGAGAT ATAGCTTATA AGGCTTTACT TGTAAGAGAT AAGCTAGTAA ATGAAAATAA TAAGGAACCT ACTGTATCTC AAATAGCAAA AGAGCTTAAA ATTCCAAGGG AAGATGTTGT TTTTGCCCTA GATGCAATTC AAGATCCAGT TTCTTTATTT GAGCCTATTT ATCATGATGG TGGAGATGCA ATATATGTAA TGGATCAGAT AAGTGATTCA AAAAATCAAG ATGATAGTTG GCTTGAAAAT ATAGCAATAA AGGAAGCTAT GAAGAAATTA AACGATAGAG AAAAACTTAT ATTGAATTTG AGATTCTTTA ATGGAAGAAC TCAAATGGAG GTAGCTGATG AAATTGGTAT ATCTCAAGCA CAAGTTTCAA GGTTGGAAAA AATAGCATTA AAGCATATGA GGAAGTATGT ATAG
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Protein sequence | MMINKVEICG VNTAKLPVLK EKEMKELLLQ MQNGDTSARE KFIKGNLRLV LSVIQRFNNR GENVDDLFQV GCIGLMKSID NFDLSQNVKF STYAVPMIIG EIRRYLRDNN TIRVSRSLRD IAYKALLVRD KLVNENNKEP TVSQIAKELK IPREDVVFAL DAIQDPVSLF EPIYHDGGDA IYVMDQISDS KNQDDSWLEN IAIKEAMKKL NDREKLILNL RFFNGRTQME VADEIGISQA QVSRLEKIAL KHMRKYV
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