Gene CPF_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_2009 
Symbol 
ID4203764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2249746 
End bp2251083 
Gene Length1338 bp 
Protein Length445 aa 
Translation table11 
GC content31% 
IMG OID638082878 
Producthypothetical protein 
Protein accessionYP_696442 
Protein GI110800057 
COG category[C] Energy production and conversion 
COG ID[COG1625] Fe-S oxidoreductase, related to NifB/MoaA family 
TIGRFAM ID[TIGR03279] putative FeS-containing Cyanobacterial-specific oxidoreductase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGTA GAATTGCTGA AGTCTTACCA GGAGGAATTG GTGAGGAATT AGGCTTTGAA 
AAGGGAGATA TACTATTAAG CATAAACGGT ACTAAAGTTG AAGATATACT TGATTATAGA
TTTTTATTAG CAGACGAATA CGTTGAGGTA GAAATATTAA AACCAAACAA AGAGGTTTGG
GAGTTTGAAA TAGAAAAGGA ATATGGCGAA GATTTAGGAG TGGAATTTGA AGAGGCCATC
CTAGACAAAG CTAAAAGTTG TACAAATAAA TGTATATTTT GCTTCATAGA TCAATTACCA
AAGGGAATGA GAAAAACTTT ATATTTTAAG GACGATGATT CAAGACTTTC ATTTTTACAA
GGTAACTTTG TTACTTTAAC AAATATGAAG GATGAAGATA TTGATAGAAT TATAAAATAT
AGAATAAGTC CTATAAATGT ATCAGTTCAT ACAACAAATC CAGATTTAAG AAAAAAAATT
CTTAATAATA GATTTGCAGG GAATGTATAT GAAAGATTAC AAAAATTAGC GGCAGCTGGT
ATAACTGTAA ATGCTCAAAT AGTTGTTATG CCAGGAATAA ACAATGGAGA CGAATTAGTT
AGAACTGTAG AAGATCTTTA TAAATTACGT CCTTCAATTG AAAATGTTGC TGCTGTACCA
ATTGGAATAA CAAAGTTTAG AGAAGGATTA GCTGACCTTG AAATATATAA TAAAGAAACA
GCTAAAGAAG AATTAGATAG AATAAAAGTT CTTCAAGAAA AATACATGAA AGAAATAGGA
AGCCCATTTG TAAGATTATC AGATGAGTTT TATGTTATGG CAGATGAGGA AGTTCCAAAT
GAAGAATTCT ATAATGGATA TGAGCAAATA GAAGACGGAG TTGGAATGAT AAGACTTCTA
AGAGAAACCA TGGCAGTAGA TATAAAGAAT AAGTTAACTA AAAGTGGAAA AGGTAAATTT
ACTCTTATTA CAGGAACATC TGCTTTTAAA GAATTAGATC AGGTTTGTAC CGATATAAGA
GAAGAGAATA ATAATATAGA TATTAAGTGT AAGGTTATAT TAAATGATTT CTTTGGGCAC
ACAATAACAG TTGCAGGACT TTTAACTGGG CAAGATGTTA TTGCTCAACT TAAGGATAAC
ATTGATAGTG AGTACTTAAT TATGGCAGAT AACATGTTTA GAAAAGGTTA CGAGCCAGGA
GATATAACTC AAAGAATAAT GTTAGATGAT TTGACAGCAA AGGATATTGA GGAAAGATTG
GGAGTTAAAG TTATAGTTTG TAGCTATACA GGGGAAGACC TAATAGACTT AATAAATGAA
CACTGTGAGG AGGAATAA
 
Protein sequence
MKSRIAEVLP GGIGEELGFE KGDILLSING TKVEDILDYR FLLADEYVEV EILKPNKEVW 
EFEIEKEYGE DLGVEFEEAI LDKAKSCTNK CIFCFIDQLP KGMRKTLYFK DDDSRLSFLQ
GNFVTLTNMK DEDIDRIIKY RISPINVSVH TTNPDLRKKI LNNRFAGNVY ERLQKLAAAG
ITVNAQIVVM PGINNGDELV RTVEDLYKLR PSIENVAAVP IGITKFREGL ADLEIYNKET
AKEELDRIKV LQEKYMKEIG SPFVRLSDEF YVMADEEVPN EEFYNGYEQI EDGVGMIRLL
RETMAVDIKN KLTKSGKGKF TLITGTSAFK ELDQVCTDIR EENNNIDIKC KVILNDFFGH
TITVAGLLTG QDVIAQLKDN IDSEYLIMAD NMFRKGYEPG DITQRIMLDD LTAKDIEERL
GVKVIVCSYT GEDLIDLINE HCEEE