| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1998 |
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| Symbol | priA |
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| ID | 4201469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2236983 |
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| End bp | 2239178 |
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| Gene Length | 2196 bp |
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| Protein Length | 731 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638082867 |
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| Product | primosome assembly protein PriA |
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| Protein accession | YP_696431 |
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| Protein GI | 110798841 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
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| TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGAGAAAT TTGCTGAAGT AATTGTAAAT AGTGAAGCTG TTACAATTGA TAAGCCTTTT
ACATATAAGA TTAAAGAAGA TTTAGTTCAT AATATAAAGG TTGGACATAG AGTTTTAATT
CCTTTTGGAA ATGGAAATAA AAAAATTGAA GGTTTTGTTT TAAAAATATT AGATAATGTT
GAAAATAAAA GTATAAGATA TAAATCTATA TATAATGTTT GTGATAATGA ACCCTTATTA
AGTGAAGATT CTTTAAAGCT TATTAAATTT TTAAGAGAGA AATATTTATG TAAGTATATA
GATGCTATAA GAGTTATGAT TCCACCTAAA ATAATGAGTG GAAATAAGGA AAAAACAAAA
CAAGTTATAG TATTTAAAAA ATATATAGAA GAATTAAGTG AGCCACAAAA AAGAACTTTA
GAGCTAATTG AAGAAAAAAG TGGTGGTTTC ACAAAAGCAG AATGGAATAA AATTTTTAAT
ATATCAACAT ATATGATAAA TAAATTAATA GAATTAGATT GTGCTTCTAG TGAAGAAGTA
AGGGTTGGAA GGGAAAATTT AAGAGAATTT AAGCCTTATC CGCCTAAGAG TTTAAATGAA
GAACAGATAA GAGCATATGA TACAATTTTA GAAAGTGATA AAAATATATT TTTATTAAAG
GGCGTAACTG GAAGTGGAAA AACAGAAGTA TATATGAATT TAGTTAGTTA TATGCTCCTT
TTTGAAAAGA GTTCATTAAT ATTAGTACCA GAAATAGCTC TAACTCCTCA AATGATTGAA
AGATTTAAAG GGAGATTTGG AAAAGATGTA GCGGTCTTTC ATAGTAGGCT TTCAGATGGA
GAGAGATATG ATGAATGGTA TAGGGTTAAA AATGATCAAG TTAAGGTTGT TATAGGAGCC
AGATCTGCTA TATTTTTACC CTTTAATGAT TTAGGACTAA TAGTAGTAGA TGAAGAACAT
GAAAGTAGTT ATAAATCAGA TATGAATCCT AAATATAATA CTATAGAAGT TTGTGAGTAT
TTAAGTTTTC TAAAAAATTG TAAGGTTGTT TTAGGTTCAG CAACCCCTAG TGTTGTTAGT
TTTTATAAAG CACTTAAAGG GAATTATGAA TTAATTGAAC TTAAAAAGAG AGTTAATAAT
GGAGAACTTC CTAATGTATC TATTGTGGAT ATGAGGGAAG AGCTAAAATC AAATAATAAA
ACAATGTTTA GTAGGGATTT ATATTTGAAG ATAAAAGATA GATTAGAGAA AAAAGAACAA
ATAATTTTGT TTTTAAATAG AAGAGGATTT TCATCCTTTG TTTCTTGTAG AAGTTGTGGA
TTTGTTTTTA AATGTAACAA TTGTGACATA TCAATGACTT ATCATAATAA TGGATACTTA
GTTTGCCATT ATTGTGGAAA TACTGAAAAG ATGCCTAAGC TTTGCCCTAA GTGTGGCAGT
AACTATGTTA AACATTTTGG GGTAGGAACA GAGAAATTAG AGGAAGCAGT ACATCATTAT
TTTAAAGAAG CAAAGGTTTT AAGGATGGAT GTAGATACAA CAAGAAAGAA AAATTCTCAT
GAGGAAATTT ATAACTCATT TAAAAGTAAA GAAGCAGATA TATTAATAGG AACTCAGATG
ATAGCTAAGG GGCTTGATTT CCCAGATGTA ACCTTAGTTG GAGTTATGGC TGCAGATATG
TCTTTAAATT TGCCAGATTA TAAGTCTAGT GAAAAGACAT TTCAACTTAT AACTCAGGTA
AGTGGTAGAG CAGGACGTGG TGATAAAAAG GGAGATGTAA TAATTCAAAG TTATTCTCCA
AAACATTATG CTTTGACCTG TGCAAGGGAT AATAATTATG AAGAGTTCTT TAAAAGAGAA
ATAAATGTAA GAAAACTTAT GGCATATCCA CCTTTTGATG ATTTGTTTTT AATAAACCTA
AGTGCAAAGG GAGAAATAAA AGTAAAGATT TTTGCAAAAA AATTAGAGAT GTATTTACGT
AATATCTTAA AAGAATATGA TAATATATTT ATATACGAAG CATGTCCTTG TTCTATAAGT
AAAATAAAAA ATGTTTATAG ATGGCAAATT CTAATTAAGG GAAAATTAGA TTTAGAGGTA
TGCTCTAAAA TAAAAAAAGG GGTTTATGAA TTATCCAAAG ATGTTTATAA TGAGATTAAG
ATTGGTTTAG ACATAAATCC TAATAGCTTA ATGTAA
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| Protein sequence | MEKFAEVIVN SEAVTIDKPF TYKIKEDLVH NIKVGHRVLI PFGNGNKKIE GFVLKILDNV
ENKSIRYKSI YNVCDNEPLL SEDSLKLIKF LREKYLCKYI DAIRVMIPPK IMSGNKEKTK
QVIVFKKYIE ELSEPQKRTL ELIEEKSGGF TKAEWNKIFN ISTYMINKLI ELDCASSEEV
RVGRENLREF KPYPPKSLNE EQIRAYDTIL ESDKNIFLLK GVTGSGKTEV YMNLVSYMLL
FEKSSLILVP EIALTPQMIE RFKGRFGKDV AVFHSRLSDG ERYDEWYRVK NDQVKVVIGA
RSAIFLPFND LGLIVVDEEH ESSYKSDMNP KYNTIEVCEY LSFLKNCKVV LGSATPSVVS
FYKALKGNYE LIELKKRVNN GELPNVSIVD MREELKSNNK TMFSRDLYLK IKDRLEKKEQ
IILFLNRRGF SSFVSCRSCG FVFKCNNCDI SMTYHNNGYL VCHYCGNTEK MPKLCPKCGS
NYVKHFGVGT EKLEEAVHHY FKEAKVLRMD VDTTRKKNSH EEIYNSFKSK EADILIGTQM
IAKGLDFPDV TLVGVMAADM SLNLPDYKSS EKTFQLITQV SGRAGRGDKK GDVIIQSYSP
KHYALTCARD NNYEEFFKRE INVRKLMAYP PFDDLFLINL SAKGEIKVKI FAKKLEMYLR
NILKEYDNIF IYEACPCSIS KIKNVYRWQI LIKGKLDLEV CSKIKKGVYE LSKDVYNEIK
IGLDINPNSL M
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