| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1997 |
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| Symbol | def |
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| ID | 4203791 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2236526 |
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| End bp | 2236969 |
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| Gene Length | 444 bp |
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| Protein Length | 147 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638082866 |
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| Product | peptide deformylase |
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| Protein accession | YP_696430 |
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| Protein GI | 110799951 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
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| TIGRFAM ID | [TIGR00079] peptide deformylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGGCAATAA GAAACTTAAG ATTTAATGAC GACGAAATAT TAAGAAAAAA ATGTAGAGTA
GTTGATGACA TTAATGATAG AATAAAAGTC TTAGTAGAAG ATATGATAGA AACTATGTAT
GAAAATAATG GAGTTGGATT AGCAGCACCA CAAGTTGGAA TACTAAAGAG GATCTTTGTT
GTTGATGCTA TGGATGGAGC AGGTTCTAGA GTATTCATAA ATCCAGAAAT ATTAGAAAAA
AGTGGAGAGC AAACTGATGA AGAAGGATGT TTAAGCTTAC CAGGTAGACA TAAACCAGTA
AAGAGAGCTA ATAAAATAAA GATAAAGGCG TTAGATGTTA ATGGAAATGA GTTTGTATTA
GATGCAGAAG AATTTTTAGC AAGAGCTATA CAACATGAAT ATGATCATTT AGAGGGAGTA
CTTTTTATAG ATCATGAGCT TTAA
|
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| Protein sequence | MAIRNLRFND DEILRKKCRV VDDINDRIKV LVEDMIETMY ENNGVGLAAP QVGILKRIFV
VDAMDGAGSR VFINPEILEK SGEQTDEEGC LSLPGRHKPV KRANKIKIKA LDVNGNEFVL
DAEEFLARAI QHEYDHLEGV LFIDHEL
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