Gene CPF_1985 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1985 
Symbol 
ID4203653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2224553 
End bp2226199 
Gene Length1647 bp 
Protein Length548 aa 
Translation table11 
GC content33% 
IMG OID638082854 
ProductDAK2 domain-containing protein 
Protein accessionYP_696418 
Protein GI110799755 
COG category[R] General function prediction only 
COG ID[COG1461] Predicted kinase related to dihydroxyacetone kinase 
TIGRFAM ID[TIGR03599] DAK2 domain fusion protein YloV 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA ATAAAGTAAA TGGGGAACAC TTGTATTATA TGATGAGTAA TGCAGCAAAT 
AAGCTAGAGT TACAGAGTGA ATATGTAAAC TCTCTTAACG TTTTCCCAGT TCCAGATGGA
GATACAGGAA CAAACATGTC TATGACATTT AGAGCTGCTG TTAAGGAAAT CGAAGGAATG
GATAACAAAA ACATTGGTGA AGTTTCTAAG AAACTAGCTA AGGGTGCTCT TATGGGTGCA
AGAGGAAACT CAGGTGTTAT TCTTTCACAA ATTCTTAGAG GTATATCAAA AGGGCTTGAA
GGAAAAGAAG AGGCTGATGC AAGTGAATTT GCTAATGCAC TTTTAGAGGG AAGTAAATCA
GCGTATAAGG CTGTTATGAG ACCAACAGAG GGAACAATAC TTACAATTGT TAGAACTGCT
GGTGAAGTGG CTGTAGCCTT AAAAGAAGAT AATATAACTG AACTTATGAG AGAAGTATGC
AGAGAAAGTA AAATTATGCT TGATAAGACA CCAGAAATGT TACCAGCATT AAAGAAAGCT
AAAGTTGTTG ATTCAGGCGG AATGGGATTA TTAATAATCC TTCAAGGAAT GCAAGAAGCT
TTAGAAAATG GATTAAAAGT AACTACAGGA ACACCACAAG CTGTTAAATC TTCAGTAGCT
AAGGCTCAAA GAAGTGAAAC TATGAGTGAA GAAGATATTA AATTTGGATA CTGTACTGAG
TTTATAATCT TAGGGGACTC AAACCATGCA GAAGAATTTA AATCAAAAGT TATAAATAAG
GGTGATTCTT TAGTTGTTGT TGGATATGAG GATGTAATTA AAGTTCATAT TCACACAAAT
AATCCAGGAA AAGTTCTAGA AGAGGCAGTT AAATTTGGAG AACTTTCAAA AATTAAGATT
GATAACATGA GAGAAGAGCA TAGAGAAATG CTTGAAGGTA TGTATGAAGA GGCAGCTGAA
ACAGAGGAGA GTGTTGCAGC TGGAGAGTTT AAAAAATATG CATTTATATC AGTAGCTATG
GGTGAAGGTA TGAAAAACAT ATTTAAGGAC TTAGGTGTTG ATTATGTTAT AGAAGGTGGT
CAAACTATGA ACCCAAGTAC TCAAGATATG TTAGAAGCTA TTGAAAAATT AAATGCTGAG
CATATATTTA TTTTACCTAA CAATAAAAAT ATAATTATGG CAGCTAATCA AGCAGCTGAA
ATATCAGATA AGGATATAAG AGTTATACCA ACTAAGACAA TTCCTCAAGG AATAACTTGT
ATAACTATGT TTAACCCAGA AGCTGACGTT GAAGAAAATA CTGAAGAATT AAAAGAAGCT
ATGGAAATGG TAAAAACAAC TTCTGTAACA TATGCTGTTA GAGATACTGA AGTTGATGGA
AAAGAAATCA AAGAAGGTAA TATCTTAGGC TTAGTTGAAG GTAAGATAAA AGAAGTTGGA
GAAGATCCAT ATAAAGTAGC TGAAGATTTA ATAGATTCTT TAGTTGATGA AGATTCAGAG
TTAATCACTA TATTCTATGG TAAAGACTGT GAAGAGGAAA AAGTTGATGC CTTAATTGAA
AAACTAGAAG GAAAATATGA AGATTTAGAT GTTCAATGTT ATAAGGGTGA ACAGCCATTA
TATTACTTCA TAATGTCAGT AGAATAA
 
Protein sequence
MKFNKVNGEH LYYMMSNAAN KLELQSEYVN SLNVFPVPDG DTGTNMSMTF RAAVKEIEGM 
DNKNIGEVSK KLAKGALMGA RGNSGVILSQ ILRGISKGLE GKEEADASEF ANALLEGSKS
AYKAVMRPTE GTILTIVRTA GEVAVALKED NITELMREVC RESKIMLDKT PEMLPALKKA
KVVDSGGMGL LIILQGMQEA LENGLKVTTG TPQAVKSSVA KAQRSETMSE EDIKFGYCTE
FIILGDSNHA EEFKSKVINK GDSLVVVGYE DVIKVHIHTN NPGKVLEEAV KFGELSKIKI
DNMREEHREM LEGMYEEAAE TEESVAAGEF KKYAFISVAM GEGMKNIFKD LGVDYVIEGG
QTMNPSTQDM LEAIEKLNAE HIFILPNNKN IIMAANQAAE ISDKDIRVIP TKTIPQGITC
ITMFNPEADV EENTEELKEA MEMVKTTSVT YAVRDTEVDG KEIKEGNILG LVEGKIKEVG
EDPYKVAEDL IDSLVDEDSE LITIFYGKDC EEEKVDALIE KLEGKYEDLD VQCYKGEQPL
YYFIMSVE