Gene CPF_1984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1984 
SymbolrecG 
ID4202665 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2222327 
End bp2224399 
Gene Length2073 bp 
Protein Length690 aa 
Translation table11 
GC content28% 
IMG OID638082853 
ProductATP-dependent DNA helicase RecG 
Protein accessionYP_696417 
Protein GI110799799 
COG category[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG1200] RecG-like helicase 
TIGRFAM ID[TIGR00643] ATP-dependent DNA helicase RecG 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAAAT TAGCTTTATT ATTTAAGGAG GGGATTAGGA TTAACATATA CGATGATATA 
GGATTAGTAA AAGGTGTTGG ACCTAAACTT AAAGAGAGAC TTAATAAAGT TGGTATATTT
ACTGTTTTAG ATTTACTTTT ATATTTTCCA AGGGACTATG AATTTTTAAA TGATGATATA
AGTTTAAATG GAGATACAAG TGATGAAAAA GCTATTTTAA AATGTAAAGT CCAAAGTTAT
GGAAGTTCCA TAAGAACTAG AAATGGAAAA ACTTTAACCA CAATTAACTT TACATATAAT
AATTTAAAGG TTATAGGGAA ATGGTTTAAT CAGCCTTATA TAAAAAGGAA TTTCATTTTA
GGTAATGAAT ATAATCTTAT GGGGAAATTT AAAAAGGTTA ATAATACTCT AGAGGTTATT
AATCCATTAA TACCTTGTAA AGAAGCTAAT AAAAGTGAGA TTTTACCTAT ATATACTTTG
AAAAATGGAT TAACAAACAA AATTTTAGTT AAACTTATAA ATGAAATACT TAAGAATATG
ATTATAAAAG AAAATTTACC AGATGAAATA GTGAAAAAGT ATAAACTTAT ATCCTTAGAT
AAAGCTATAA GAAGCATACA TTTTCCAGCG GGAAGAGGAG AGTTACAAAG TGCAATAAAT
AGACTTAAGT TTCAAGAATT ATTCACATAC TCCCTAAAAA TAATAATGAT GAAGGCTCAT
ATAAAGAAAG AAAATAGCGG AATAAGTTTT AAAATGAGTC CTCTTCTTAA GGATTTAAAA
GAGTCACTTC CATATACTTT AACTAATGCA CAATCAAGAA CTCTTAGAGA AATACTTCTA
GATCAAAAGA GAAATATTGC TATGAATAGA TTAGTTCAAG GGGATGTTGG ATCTGGAAAA
ACTTTAGTAG CATTAATATC TATGTTTAAT GTGTACATAA ACGGATATCA AACTGTTCTT
ATGGCACCTA CAGAAATATT AGCTAATCAA CATTATGCTG AAGCCAAAAA ATATTTAGAT
AAATTTGGAG TTGATATAGA GCTTTTAACT GGAAGCACTA AGGAAAAAGA AAAGAAGAGA
ATAAAAGAAA AAATAGCTTC AGGAAAAGAA ATAATGTTAA TAGGAACTCA TGCCTTAATA
CAGGATGATG TTGAACTAAA TAATTTAGGT CTTGTGGTAA CAGATGAGCA ACATAGATTT
GGAGTAGAAC AGAGAAGTAG GCTTATAAAT AAAAATAAGA GAGCGGATGT TTTAGTAATG
ACTGCTACCC CTATTCCAAG AACTCTTTCC TTATATTTAT ATAGTGACTT GGATATTTCT
ATAATAGATG AATTACCTCC AGGAAGAAAG CCAATAGATA CTATGCTAGT AGATATGAAT
CAAAGAATGA AGGCTTATAA CTTTGCTTTA AAGGAAGTAG AGAAAGGAAG ACAATTCTAT
ATAGTATCAC CTTTAATAGA GGAAAATGAA AAGTTAAATC TAAACTCTGT TGAAAAAATT
TATGAAGAAC TTAAAAATGG AATCTTTAAG GATATAAGAA TTGAAATTTT ACACGGTAAG
ATGGCTGGAA AAGATAAGGA TAAAATTATA AATACCTTTA AAAATGGAGA AATAAAAGGT
ATAATATCTA CAACGGTTAT AGAAGTAGGT GTTAATGTAC CAAACTCTAC AATGATGATT
ATAGAAAATG CAGAGAGGTT TGGTTTAGCA CAACTTCATC AACTTAGAGG AAGAGTTGGA
AGAGGAGAAC ATAAGTCTTA TTGTATTCTT ATAGCTAATA CTAAAAATGA TATTACTAGA
AGAAGGATGG AAATAATGAC AGAGAGTTCA GATGGTTTTT ATATTGCAGA AGAGGATTTA
AAACTAAGAG GTGCTGGGGA AGTCTTTGGA ATGAGACAGC ATGGAGATGA AGGATTTATT
CTAGCTAATG TAGTTGATGA TATAAATATA TTAAAATGTG CTAATCATGA AGCTAAATTA
ATAGTAAATA ATATAAATGA AGATAATAAA AAGCTTTGTA CAGAAATAAT GAGGGGAATT
GAAAGAAATA GTAGGTATAT TTGTTTCAAT TAG
 
Protein sequence
MIKLALLFKE GIRINIYDDI GLVKGVGPKL KERLNKVGIF TVLDLLLYFP RDYEFLNDDI 
SLNGDTSDEK AILKCKVQSY GSSIRTRNGK TLTTINFTYN NLKVIGKWFN QPYIKRNFIL
GNEYNLMGKF KKVNNTLEVI NPLIPCKEAN KSEILPIYTL KNGLTNKILV KLINEILKNM
IIKENLPDEI VKKYKLISLD KAIRSIHFPA GRGELQSAIN RLKFQELFTY SLKIIMMKAH
IKKENSGISF KMSPLLKDLK ESLPYTLTNA QSRTLREILL DQKRNIAMNR LVQGDVGSGK
TLVALISMFN VYINGYQTVL MAPTEILANQ HYAEAKKYLD KFGVDIELLT GSTKEKEKKR
IKEKIASGKE IMLIGTHALI QDDVELNNLG LVVTDEQHRF GVEQRSRLIN KNKRADVLVM
TATPIPRTLS LYLYSDLDIS IIDELPPGRK PIDTMLVDMN QRMKAYNFAL KEVEKGRQFY
IVSPLIEENE KLNLNSVEKI YEELKNGIFK DIRIEILHGK MAGKDKDKII NTFKNGEIKG
IISTTVIEVG VNVPNSTMMI IENAERFGLA QLHQLRGRVG RGEHKSYCIL IANTKNDITR
RRMEIMTESS DGFYIAEEDL KLRGAGEVFG MRQHGDEGFI LANVVDDINI LKCANHEAKL
IVNNINEDNK KLCTEIMRGI ERNSRYICFN