Gene CPF_1958 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1958 
Symbol 
ID4201239 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2198979 
End bp2200502 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content31% 
IMG OID638082827 
ProductMg chelatase-like protein 
Protein accessionYP_696391 
Protein GI110798594 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0606] Predicted ATPase with chaperone activity 
TIGRFAM ID[TIGR00368] Mg chelatase-related protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0810185 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTATAA GTTTGAAAAG TTCAACTTTA ATAGGAATAG AAGGTGTAAT TGTTAATATA 
GAGGTTGATA TAAGTAAGGG GTTGCCAAGT TTTACCTTGG TAGGCTTAGC GGATACTTCC
GTTAGAGAGG CTAAGGAGAG AGTAAGAGCA GCTATTTTAA ATAGTGGTTA TGAATTTCCT
TTAGGGAGAA TAACAGTAAA TTTAGCTCCA GGTAATTTAA GAAAGGTAGG AACTGGATTT
GATCTTCCTA TAGCTTTAGC TATATTAATT GAGAGTGGTC AAATTCAAAG GGAGATTTTA
GAGAATACTG TTTATTTAGG AGAATTATCT TTAGATGGCC ATATTAGATC TGTTAATGGA
GCTTTGTGCT CTGTTATATC TGGGGTTGAA AATAACAATG ATAAGTTTAT TATACCAATG
GATAATTTAA GAGAATGTTC TTGTGTTGAT AATATTAATT TATATGGCTT CTCTCATTTA
AAAGAGGTAG TTGGATTTTT AACTTATAGA GATGTGCTAC CTTATAAAAG AGAAGAGGAA
ATTTGTGAGT TAAAGGAAGA TAATTCTTTT AATGAGATTT GTGGTCAAGA AAGTGCAAAG
AGAGCTATGA TAATTGCAGC AGCTGGAAAT CATAATGTTA TATTGCAAGG ACCTCCAGGA
TCAGGTAAAA CAATGCTTGC TAAGGGGGTT AAATCTTTAT TGCCAGAATT AAATAAAAAA
GAAATATTAG AGACAACAAG GATATATAGT GTTTCAGGAC TTTTAAATAA TACTAAAGGA
AAAATTGAAA GACCCTTTAG AAATCCACAT CATACTGCAA CAAGGGTATC CTTAATAGGT
GGAGGAAGAG ATTTAAGGGT AGGAGAAGTT ACCTTAGCTC ATAATGGTAT TTTGTTTTTA
GATGAACTTT TAGAGTTTGA TAGAAGAACC TTAGAATGTT TAAGAGAGCC TATGGAAAAT
GGAGAGATAA CCATATCTAG GAATGTAGGA AGTGTAACAT ATCCAGCAGA AGTCATGCTT
ATAGGAGCTT TTAACCCATG TCCATGTGGA AATTACTTAA GTGGTTATGA AGGAAGAATA
TGTACTTGTA GTGAATATGA ACGGATTAAA TACAGAAATA GACTTTCTAA GGCTATGCTA
GATAGAATAG ATATTTTTAC TTCTGTTAGA TATGCCTCTT ATAATGAACT TAATTCAAGT
AATAAAAAAG AAAATTTAGA GGATATAAGA AATAAAATTA AGGAAGCAAG AGAAAGACAA
AAATTTAGGT TTAAAGATTT AGAAATAACT TATAATTCTC AGATGAAACA TAGTCATATT
CAAAGTTTAA TAAGATTAGA TGAAGAATGT CATGAAGTTT TAAACAATAT ATACACAAGA
TTTTCTTTAA GTAGTAGGGC TTTAGATAGA ATTATAAAAT TATCTAGAAC CATAGCAGAT
ATGGATGGCA GTGAAGATAT TAAAAAAAGC AATATTTATG AGGCTCTTAA TTATAGAAAA
AATTTAGAGG GAGAGGTTAT ATAA
 
Protein sequence
MSISLKSSTL IGIEGVIVNI EVDISKGLPS FTLVGLADTS VREAKERVRA AILNSGYEFP 
LGRITVNLAP GNLRKVGTGF DLPIALAILI ESGQIQREIL ENTVYLGELS LDGHIRSVNG
ALCSVISGVE NNNDKFIIPM DNLRECSCVD NINLYGFSHL KEVVGFLTYR DVLPYKREEE
ICELKEDNSF NEICGQESAK RAMIIAAAGN HNVILQGPPG SGKTMLAKGV KSLLPELNKK
EILETTRIYS VSGLLNNTKG KIERPFRNPH HTATRVSLIG GGRDLRVGEV TLAHNGILFL
DELLEFDRRT LECLREPMEN GEITISRNVG SVTYPAEVML IGAFNPCPCG NYLSGYEGRI
CTCSEYERIK YRNRLSKAML DRIDIFTSVR YASYNELNSS NKKENLEDIR NKIKEARERQ
KFRFKDLEIT YNSQMKHSHI QSLIRLDEEC HEVLNNIYTR FSLSSRALDR IIKLSRTIAD
MDGSEDIKKS NIYEALNYRK NLEGEVI