Gene CPF_1957 details

Gene Information

• Locus tag: CPF_1957
• Symbol: dprA
• ID: 4203255
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 2197896
• End bp: 2198978
• Gene Length: 1083 bp
• Protein Length: 360 aa
• Translation table: 11
• GC content: 29%
• IMG OID: 638082826
• Product: DNA protecting protein DprA
• Protein accession: YP_696390
• Protein GI: 110799380
• COG category: [L] Replication, recombination and repair; [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG0758] Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake
• TIGRFAM ID: [TIGR00732] DNA protecting protein DprA

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAGAGG TTGATTTAAA TTATAAAATA TGGCTTGGAA GTTTAAAGAT TTCAAACAAT 
ATAAAAGTAG AGCTTTTAAA TCAATTAGGA AATGAAGAAA ATATATACAT ACATAGAAAG 
GATATAGAGG AAACTGGAAT TAAATGCGCT AGTAAATTTA AAAATGATAT TAACATTGAT 
TTGAATAGTA GGGTAATTAA TGATATAAAT AAGAAAGACT ATAAAATAGT AACATATTTA 
GATAAAGACT ATCCTAAAAG ACTTAAAAAT ATAGATGAAC CTCCCTATAT TCTTTTTTAT 
AAGGGGGATT TAGAAAGAGC TGAAGATACC AATGTTGCCA TTGTTGGATC GAGAAAATGT 
GATCCATATG GGAAAAGATG TGCAAGTCTT ATAGCTTCAG GGCTAGGAAA AGCAGGTGTT 
GGAATAGTAA GCGGTGGAGC CTTTGGGGTG GATACTGAAG CACATAAAAA GTGTGTTGAA 
GAAAATTTTT ATAATGTTGC CGTTTTTGGT TGTGGAATAA ATTTAGATTA TCCTGTCTAT 
AATAGAGAAT TGTATAAAAA AATAATTAAA AATGGATGTA TAATTAGTGA ATTTTTCCCT 
GATACGCCAC CGCTTAGATA TAATTTTCCT CAGAGGAATA GAATAATAAG TGGATTATCT 
GAAGCTGTTA TAGTGGTTCA AGCTGGAGAA AAAAGTGGAT CTTTAATAAC TGCAAATTAT 
GCTGTAAATC AAGGAAAAGA TGTTTTTGCA GTGCCTGGAG ATGTGTTTTC TTCTCAAAGC 
AGGGGCTGTA ATAATCTTAT AAAAGATGGA GCTGGTATAT TCACTAATAT AGGTGATTTA 
TTAAATTCAA TACCTTTTAA AATAAAAAAA GAAGGAAAAT GTAATAAAGA TGGCAAAAAA 
GAGGAAAATT CAGAGATTAA CCAGTTGCTT TTAAGCATAT TAGAGAATAA TATTCTACAT 
ATAGACGATA TTATAAGAGT AACAAATATT GACACATCTA TCATATATGA GTTATTATGT 
GAATTGCAAT TTGAAAATAA AATAGAAGTT ATACCAGGAG ATTATTATAC AAAAATAATA 
TGA 

 

Protein sequence

MKEVDLNYKI WLGSLKISNN IKVELLNQLG NEENIYIHRK DIEETGIKCA SKFKNDINID 
LNSRVINDIN KKDYKIVTYL DKDYPKRLKN IDEPPYILFY KGDLERAEDT NVAIVGSRKC 
DPYGKRCASL IASGLGKAGV GIVSGGAFGV DTEAHKKCVE ENFYNVAVFG CGINLDYPVY 
NRELYKKIIK NGCIISEFFP DTPPLRYNFP QRNRIISGLS EAVIVVQAGE KSGSLITANY 
AVNQGKDVFA VPGDVFSSQS RGCNNLIKDG AGIFTNIGDL LNSIPFKIKK EGKCNKDGKK 
EENSEINQLL LSILENNILH IDDIIRVTNI DTSIIYELLC ELQFENKIEV IPGDYYTKII