Gene CPF_1949 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1949 
SymbolcdsA 
ID4203200 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2189741 
End bp2190544 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content28% 
IMG OID638082818 
Productphosphatidate cytidylyltransferase 
Protein accessionYP_696382 
Protein GI261876161 
COG category[I] Lipid transport and metabolism 
COG ID[COG0575] CDP-diglyceride synthetase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTTGGG TGAAATCTAA TAGCAGATAT CTAGGCGCAC TTATAATGGC TCCATTTATT 
GCTTTTATAT TCCTAGGTGG AATTTGGCTT AAGCTATTTA CTATTGCTCT TTCTTTTGCA
GGATTATATG AATATTATAA AACTGTTAAA GTAGCAAAAT TAAAGCCTAT TTCCATAGGG
GGATATATAT TATTAATATT ATATTACTTA ACTTCAAATA ATTTTGAAAT GTTATCATTT
TTAATAATAA TAGCTACATT TATATTACTT TGTGTTCCTA TACTTAATAT TGAATATACA
TTTATAGATG TTGCAGTTAC TATTTTAGGA TTTATATATG TAGGAGTTTT CTTTAGCTTC
ATACATTTAG TAAACATCAA AGAAGGTGGA CAATACCTAG TTTGGTTAAT ATTCCTATCA
TCATGGCTTT GTGATACTGC TGCATACTAT TCAGGTAGAT TCTTTGGTAA ACACAAATTA
TGTCCAAAGG TTAGTCCTAA GAAGACTATA GAAGGTTCTA TAGGAGGAAT ATTAGGAAGT
ACATTAGCTT GTGGAATATT TGGTATAATA ATATCTAATA GTTTCTCTTT AATACCTGTA
TATCATTATT TTATAATAGG TATATTATGT GGAGTATTCT GTCAATTTGG TGATTTAGTT
GCTTCATCAA TAAAGAGATA CGCAGGAATA AAAGATTATA GTAATTTAAT ACCAGGACAT
GGTGGAATAT TAGATAGATT TGACAGTATA TTATTTGCTG GAACAATAGT ATTCTTCTAT
TTAACACTTG TCTTAAAATT TTAA
 
Protein sequence
MIWVKSNSRY LGALIMAPFI AFIFLGGIWL KLFTIALSFA GLYEYYKTVK VAKLKPISIG 
GYILLILYYL TSNNFEMLSF LIIIATFILL CVPILNIEYT FIDVAVTILG FIYVGVFFSF
IHLVNIKEGG QYLVWLIFLS SWLCDTAAYY SGRFFGKHKL CPKVSPKKTI EGSIGGILGS
TLACGIFGII ISNSFSLIPV YHYFIIGILC GVFCQFGDLV ASSIKRYAGI KDYSNLIPGH
GGILDRFDSI LFAGTIVFFY LTLVLKF