Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1949 |
Symbol | cdsA |
ID | 4203200 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2189741 |
End bp | 2190544 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 638082818 |
Product | phosphatidate cytidylyltransferase |
Protein accession | YP_696382 |
Protein GI | 261876161 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0575] CDP-diglyceride synthetase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGATTTGGG TGAAATCTAA TAGCAGATAT CTAGGCGCAC TTATAATGGC TCCATTTATT GCTTTTATAT TCCTAGGTGG AATTTGGCTT AAGCTATTTA CTATTGCTCT TTCTTTTGCA GGATTATATG AATATTATAA AACTGTTAAA GTAGCAAAAT TAAAGCCTAT TTCCATAGGG GGATATATAT TATTAATATT ATATTACTTA ACTTCAAATA ATTTTGAAAT GTTATCATTT TTAATAATAA TAGCTACATT TATATTACTT TGTGTTCCTA TACTTAATAT TGAATATACA TTTATAGATG TTGCAGTTAC TATTTTAGGA TTTATATATG TAGGAGTTTT CTTTAGCTTC ATACATTTAG TAAACATCAA AGAAGGTGGA CAATACCTAG TTTGGTTAAT ATTCCTATCA TCATGGCTTT GTGATACTGC TGCATACTAT TCAGGTAGAT TCTTTGGTAA ACACAAATTA TGTCCAAAGG TTAGTCCTAA GAAGACTATA GAAGGTTCTA TAGGAGGAAT ATTAGGAAGT ACATTAGCTT GTGGAATATT TGGTATAATA ATATCTAATA GTTTCTCTTT AATACCTGTA TATCATTATT TTATAATAGG TATATTATGT GGAGTATTCT GTCAATTTGG TGATTTAGTT GCTTCATCAA TAAAGAGATA CGCAGGAATA AAAGATTATA GTAATTTAAT ACCAGGACAT GGTGGAATAT TAGATAGATT TGACAGTATA TTATTTGCTG GAACAATAGT ATTCTTCTAT TTAACACTTG TCTTAAAATT TTAA
|
Protein sequence | MIWVKSNSRY LGALIMAPFI AFIFLGGIWL KLFTIALSFA GLYEYYKTVK VAKLKPISIG GYILLILYYL TSNNFEMLSF LIIIATFILL CVPILNIEYT FIDVAVTILG FIYVGVFFSF IHLVNIKEGG QYLVWLIFLS SWLCDTAAYY SGRFFGKHKL CPKVSPKKTI EGSIGGILGS TLACGIFGII ISNSFSLIPV YHYFIIGILC GVFCQFGDLV ASSIKRYAGI KDYSNLIPGH GGILDRFDSI LFAGTIVFFY LTLVLKF
|
| |