| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1948 |
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| Symbol | dxr |
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| ID | 4201805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2188227 |
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| End bp | 2189381 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 638082817 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_696381 |
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| Protein GI | 110799236 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAGAGAA TATCTATACT AGGGGTAACT GGTTCTATAG GAACTCAAAC TTTAGATGTA
TTAAGATTTC ATAAAGAAGA TTTTGAATTA GTTGGTATAA CAGCTAATAG AAATATAGAA
TTAACAATGG ATATAATAAA AGAGTTTTCA CCTAAATACG TTGCAATAAA TCACGAGGAG
TCTTACAAAA AACTTGTAGA TTTAGTAAAA AGCCAAGGAT TAAAGTGTGA AGTTATCTAT
GGGATGGAAG GCTTAGTTAA AGTTGCTACT TTAGATGAAA TTGATATAGT TGTTACTTCT
GTTGTTGGTA TGATTGGATT AAAACCAACT GTAGAAGCTA TAAGAAAAGG AAAAGATATC
GCTTTAGCAA ATAAAGAAAC TTTAGTAGTA GCAGGTGAAC TTGTTATGAG AGAAGCTAAA
GAAAATGGAG TAAAAATACT TCCAGTAGAC TCAGAGCATA GTGCTATATT CCAATCATTA
CAAGGAAATG CTCATAACAA AATTGATAAA ATACTTTTAA CTGCTTCTGG AGGGCCTTTT
AGAGGGTTTA CTATAGAAGA TTTAAAATCA GTAACTCCAG AAAGAGCTCT TAAGCATCCA
AAGTGGAATA TGGGTCAAAA AATATCAATA GATTCATCAA CTCTAATGAA CAAGGGATTA
GAAGTTATAG AAGCTCATTG GTTATTTGAT TGTCCTTATA AAGATATAGA GGTTGTAGTT
CATCCACAAT CAATAATACA TTCTATGGTT CAATATACTG ATGGAGCAGT TATAGCTCAA
TTAGGTGTAC CAGATATGAA ATTACCAATT CAATATGCTT TAAATTATCC AAATAGGCAA
GGAAATATTA GTGAAAAGTT AGATTTATTT AAGATTAGAG AGTTAACTTT TGAAAAGCCG
GATTTAGATA CATTTAAATG CTTAAAATTA GCTTATGAAG CAGGAGAAAA GGGAAAGCTT
ATGCCAACAA TTTTAAATGG GGCTAATGAA GTATGTGTTG AACTATTCCT AAATAAAAAG
ATAACATATC TGCAAATACC AGAGATAATA GAAGAGTGTA TGAATACTTT TGATTACAAC
AAAGAGGTTA CTCTTCATAA TGTAATAAAT TTAGACAAAG AAGTAAGACA GTATATATAT
GAAAAATATA ACTAG
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| Protein sequence | MKRISILGVT GSIGTQTLDV LRFHKEDFEL VGITANRNIE LTMDIIKEFS PKYVAINHEE
SYKKLVDLVK SQGLKCEVIY GMEGLVKVAT LDEIDIVVTS VVGMIGLKPT VEAIRKGKDI
ALANKETLVV AGELVMREAK ENGVKILPVD SEHSAIFQSL QGNAHNKIDK ILLTASGGPF
RGFTIEDLKS VTPERALKHP KWNMGQKISI DSSTLMNKGL EVIEAHWLFD CPYKDIEVVV
HPQSIIHSMV QYTDGAVIAQ LGVPDMKLPI QYALNYPNRQ GNISEKLDLF KIRELTFEKP
DLDTFKCLKL AYEAGEKGKL MPTILNGANE VCVELFLNKK ITYLQIPEII EECMNTFDYN
KEVTLHNVIN LDKEVRQYIY EKYN
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