| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1947 |
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| Symbol | |
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| ID | 4201347 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2187208 |
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| End bp | 2188215 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 638082816 |
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| Product | putative membrane-associated zinc metalloprotease |
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| Protein accession | YP_696380 |
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| Protein GI | 110801002 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0750] Predicted membrane-associated Zn-dependent proteases 1 |
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| TIGRFAM ID | [TIGR00054] RIP metalloprotease RseP |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTATATAA TTTTTGCTTT ATTAGCATTT AGTGCTTTAA TCTTAGTTCA TGAGCTTGGA
CATTTTATTG TGGCTAAATT AAATGGGATT TATGTTGAGG AATTTGCTAT TGGTATGGGT
CCAAAGCTTT TTGGTGTAAA AGTTGGAGAA ACAGAATATA ACTTAAGAAT CCTTCCTTTT
GGTGGATTTG TTAAAATGCT TGGTGAAGAA GATGAAAGTG ATGATTCAGG AAGCTTAAAT
GCAAAAACTC CTATTCAAAG AATACTTGTT ATGGGAGCAG GGGCATTTAT GAATTATGTA
TTAGCCCTTA TAATATTTAT TGGGCTAGCT ATGAGTTCTG GCTTTGCAGA AAATAAAGTA
GCAAGTGTAG TACCTAATTC ACCAGCACAA GAAATAGGAA TTGAACAGGG AGATGAATTC
CTAAAAATAG ATGGAAACAA AATTCATACA ACTGATGATT TTAGAATGGG ATTAGCTTTA
GCTAAGGGAA ATCCAGTTGA ATTAGAGATA AAAAGAGGCA ATGATGTCTT AACAAAAACA
GTACAGCCGA TTTTAAATGA GAGTGGAATG TATCAAGTTG GAATAAGCTA TGCTTTAGTT
GAAAAACCTA CTTTGCTTCA AGGAATAAAG CAAGGATTTA ATGAAACAAG AAGTCTTGTA
TCTCAGTCAT TTATTGCATT AAAGACTATT GTTACAGGAG AAGCAAATTT AAAAACTGAT
GTAGGAGGTC CTGTTACAAT AATTAAAATG TCAGGGCAAG CAGCAAAAGC AGGAGCAAAT
ACTCTTTTAT GGTTTATGGC ATTTTTAAGT GTTCAATTAG CAGTATTTAA CCTTTTACCA
TTCCCAGCTT TAGATGGTGG AAGAATATTT ATAGAGCTTA TTCAAATGAT AATTAGAAAA
GAAATACCTG CTAAATATAT TGAAGCTGTA AATACCGTTG GATTCATGCT CCTTATGGGA
CTTATGGTAT TAGTAACTAT AAAAGATATA ATATTCCCGA TACTATAG
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| Protein sequence | MYIIFALLAF SALILVHELG HFIVAKLNGI YVEEFAIGMG PKLFGVKVGE TEYNLRILPF
GGFVKMLGEE DESDDSGSLN AKTPIQRILV MGAGAFMNYV LALIIFIGLA MSSGFAENKV
ASVVPNSPAQ EIGIEQGDEF LKIDGNKIHT TDDFRMGLAL AKGNPVELEI KRGNDVLTKT
VQPILNESGM YQVGISYALV EKPTLLQGIK QGFNETRSLV SQSFIALKTI VTGEANLKTD
VGGPVTIIKM SGQAAKAGAN TLLWFMAFLS VQLAVFNLLP FPALDGGRIF IELIQMIIRK
EIPAKYIEAV NTVGFMLLMG LMVLVTIKDI IFPIL
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