Gene CPF_1944 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1944 
Symbol 
ID4202626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2181015 
End bp2181479 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content28% 
IMG OID638082813 
Producthypothetical protein 
Protein accessionYP_696377 
Protein GI110799296 
COG category[S] Function unknown 
COG ID[COG0779] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG AACAACTTGT AGCTGATCTT GAAGCACTTT GTGCTCCTAT AGTTAAAGAA 
AAGGGATATG ATTTATATCA TATTGAATAT GTAAAAGAAA ATAATGAATA TTATTTAAGA
TTATATATAG AAAAGCCAGA GGAGAGAATT TCTCTAAGGG ATTGTGAAAT TGTAAGTAGA
GCATTAAGTG ATATGCTTGA TATAGAAGAT CCAATAAAAG ATGCGTACTT CTTAGAAGTT
TCATCACCAG GATTAAATAG AAGATTACAT AGTGATGAGC ATTTTAATAG ATTTATAGGA
AAAGAAGTTT TTGTTGGATT TAAGAGTTCT TTAAGTGGAA GAAAAAATGT AAAAGGAATT
CTTAAAGATG TACAAGAAAA TGAAATAATA GTTGAATGTG AAGGGAATGA AATAAAAGTT
CCTAAAGATA AAATTAAGAC AGCGAACCTT GAAGGGGAGA TATAA
 
Protein sequence
MKKEQLVADL EALCAPIVKE KGYDLYHIEY VKENNEYYLR LYIEKPEERI SLRDCEIVSR 
ALSDMLDIED PIKDAYFLEV SSPGLNRRLH SDEHFNRFIG KEVFVGFKSS LSGRKNVKGI
LKDVQENEII VECEGNEIKV PKDKIKTANL EGEI