| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1942 |
|---|
| Symbol | |
|---|
| ID | 4203244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2179601 |
|---|
| End bp | 2179867 |
|---|
| Gene Length | 267 bp |
|---|
| Protein Length | 88 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 30% |
|---|
| IMG OID | 638082811 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_696375 |
|---|
| Protein GI | 110801360 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2740] Predicted nucleic-acid-binding protein implicated in transcription termination |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACCTA AAAAAATTCC AATGAGAATG TGCAATGGTT GCATGGAAAT GAAGCCTAAA
AAAGAACTGA TAAGAATAGT TAAAAATGCT GAAGGAGAAG TTTCTGTAGA TTTAACTGGT
AAAAAGTCAG GAAGAGGGGC TTACATTTGT AAAAGTGTTG AATGTTTAGA AAAAGCATTT
AAAGCAAAAA GATTAAATAA AAATCTTCAA TCTAACATTG GAGATGAAGT CTATGATAGA
TTGAGGGATG AGATAACAAA TGGATAA
|
|---|
| Protein sequence | MKPKKIPMRM CNGCMEMKPK KELIRIVKNA EGEVSVDLTG KKSGRGAYIC KSVECLEKAF
KAKRLNKNLQ SNIGDEVYDR LRDEITNG
|
|---|
| |