| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1937 |
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| Symbol | truB |
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| ID | 4201500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2175019 |
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| End bp | 2175903 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638082806 |
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| Product | tRNA pseudouridine synthase B |
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| Protein accession | YP_696370 |
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| Protein GI | 110799626 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0130] Pseudouridine synthase |
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| TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGGAG TAATTAACAT ATATAAAAAT ACGGGAATGA CTTCATTTGA TGTTGTAGCC
ATTGTAAGAA GAGTTGCAAA GATGAAAAAG GTAGGACATA CAGGAACTTT AGATCCAGCG
GCTTCTGGAG TTTTACCTGT ATGCCTTGGA AAAGCTACAA AAATTATAGA TTATATAATG
GAAAATAAAA AAGTTTATAG AGTGAATTTA AAGCTTGGTA TGGTTACTGA CACATATGAT
TTAGAAGGAG AAGTTTTAAG AGAAGAGGAT GCATCACATA TAACAAAGGA TGAAATATTA
AATTGTATAA ATTCCTTTTT AGGAACAATA GATCAAGTTC CACCAATGTA TTCTGCTTTA
AAACAAAATG GAGTAAGATT ATATGAATTA GCACGTCAAG GAATAGAAGT TCACAGAGAA
GCTAGAAAAA TTACTATTTA TTCTATTGAA AATATAAAAA TAGAATCAAA TGATAATATA
CAAATGGATG TTTGTTGTTC TAAGGGAACA TATATAAGAA GCCTTTGCTA TGATATTGGT
GAAAAATTAA ATGTTGGAGC AACAATGACT GCCTTAGAGA GAATACAAAA TGGTACATTT
ACTAAAGAAG AAGCAATAAA TATAGAAGAT TTAACAGAAG AACTTTTAGA AAAACATATT
ATTTCCATTG AAAAGGCTTT AGATTCTTTT GAAAAAATCA CAGTAAATGA GAAGTTTGGT
AAGCTTTTAA GAAATGGTGT TAAAGTATTT GATAATAGAA TGTATAGTGA AGAAGTTGAA
TTTAATAAAC TATATAGAGT ATATGAAGAC AATGGAGTCT TTTTGGGATT AGGAAAAAGG
GATGAAAAAG GATTTAAATT GGAGAAATTA CTGATAGAGG AGTAG
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| Protein sequence | MNGVINIYKN TGMTSFDVVA IVRRVAKMKK VGHTGTLDPA ASGVLPVCLG KATKIIDYIM
ENKKVYRVNL KLGMVTDTYD LEGEVLREED ASHITKDEIL NCINSFLGTI DQVPPMYSAL
KQNGVRLYEL ARQGIEVHRE ARKITIYSIE NIKIESNDNI QMDVCCSKGT YIRSLCYDIG
EKLNVGATMT ALERIQNGTF TKEEAINIED LTEELLEKHI ISIEKALDSF EKITVNEKFG
KLLRNGVKVF DNRMYSEEVE FNKLYRVYED NGVFLGLGKR DEKGFKLEKL LIEE
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