Gene CPF_1936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1936 
SymbolribF 
ID4201876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2174086 
End bp2175015 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content26% 
IMG OID638082805 
Productbifunctional riboflavin kinase/FMN adenylyltransferase 
Protein accessionYP_696369 
Protein GI110798760 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0196] FAD synthase 
TIGRFAM ID[TIGR00083] riboflavin kinase/FMN adenylyltransferase
[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTTTAA TAAATAATGA TTTTAAGAGA GTGGTTCAAA AAAGCACCTA TGTAGCTTTA 
GGGAGTTTTG ATGGAATTCA TAAAGGTCAT TTAGCTTTAA TAAACAAAAG TAATGAATTG
TCTAGGAAGA ACGATTCATT AAGTATGGTA TATACATTTA AAAATCATCC AAGAAAATTT
ATAAACAAGG AAGGTGCACC AAAACTTTTA GTAACTTTAC ATGAAAAAAT AAGAATTCTT
GAAGACTTAA AAGTTGATTT AAGTAGTTTT GTTGAGTTTA ATAAAAAGTT TATGGAACTA
GAACCAGAAG AGTTTATAGA AAATCTTATA AAAAACTATA ATGTACGAGG AATTGTTGTT
GGATTTAACT ATAGATTTGG CCATAAAAAT AAAGGTGATG TTAAGTTACT TAAGGAATTA
TGTGATTTAA AGGGATTAGA ACTTTACGTT ATAGAGCCCT TTACATATAA ATCAGAAGTA
GTTAGTTCAA CAAGAATAAG AAAAGCTTTA TCAGAAGGAG AGCTAGAAGA TGCTAATAAT
ATGTTAGGTA GGTATTTCTC ATTAAATGGT GAAGTGGTAA GTGGAAAGAA AATAGGTAGA
ACAATTAATT TTCCAACAGC AAATTTAAAG AATAATGATG AAATAATCCT TCCTAAGATA
GGAGTTTATT ATACTAATGT AGAAGTTAAT GGAGAAATTT ATAAAGGTAT AACTTCAGTT
GGGAATAATC CTACTGTAAA TGGTAAGAAT ACTACAGTAG AGACTCACAT ACTAAATTTT
GATGAAGATA TATATGGAAA GCATATAAAA CTTTACTTTA TAAGTAAGAT AAGAAATGAA
AAAAAATTTA ATTCTTTAGA AGAATTAAAA GAACAACTAA TTAAGGATAA AAAATTCGCA
GAAGAAAGTA ACATAAAAAT TTCTTTGTAA
 
Protein sequence
MILINNDFKR VVQKSTYVAL GSFDGIHKGH LALINKSNEL SRKNDSLSMV YTFKNHPRKF 
INKEGAPKLL VTLHEKIRIL EDLKVDLSSF VEFNKKFMEL EPEEFIENLI KNYNVRGIVV
GFNYRFGHKN KGDVKLLKEL CDLKGLELYV IEPFTYKSEV VSSTRIRKAL SEGELEDANN
MLGRYFSLNG EVVSGKKIGR TINFPTANLK NNDEIILPKI GVYYTNVEVN GEIYKGITSV
GNNPTVNGKN TTVETHILNF DEDIYGKHIK LYFISKIRNE KKFNSLEELK EQLIKDKKFA
EESNIKISL