| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1931 |
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| Symbol | clpP |
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| ID | 4202194 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2169144 |
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| End bp | 2169833 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638082800 |
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| Product | Clp protease |
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| Protein accession | YP_696364 |
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| Protein GI | 110799331 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.75511 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGAACATA ACAAAGAAAA TGAAAATAAA AGTATAGAAG AAATAAAAGA AATGGGAGCA
GTTTTACCTG AGCATAAGAA AGAAGATTCT AATATACAGG TTTTAACAAT AATAGGACAA
ATTGAAGGAC ATAGTGTTCA ACCGCCACAA ACTAAAACAA CTAAGTATGA GCATATGATT
CCTCAACTAA TTGATATAGA ACAAAATGAT AGAATAAAAG GTATATTATT TGTTTTAAAT
ACTGTTGGAG GGGATGTTGA AGCAGGGTTA GCAATTGCTG AGATGATAAG AAGCCTAAAA
AAACCAACAG TATCCTTAGT TATTGGGGGA GGTCATTCCA TAGGAGTTCC TCTAGCAACT
GCATCCCAAT ATTCCTTTAT TTCTCCATCA GCTACAATGA TAATACATCC AATAAGAATG
AATGGACTTG TAATAGGGGT TCCTCAAACA TTTAATTATT TTAATAAAAT GCAAGAGAGA
ATAAATGATT TTATAATAAG GACATCAGAA ATTAAATTAG ATGTACTAAA AAAGATGATG
ATGCAAACAG ATGAACTTTT AAATGATATG GGAACAATAT TAGTTGGAGA AGAAGCAGTT
AAGTGCGGAT TAATAAACGA AGTTGGCGGT GTTAAGGAAG CCTTAGATAA GTTAAATAGC
TTAATAGAAG CTTATAATGT AGAACCATAG
|
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| Protein sequence | MEHNKENENK SIEEIKEMGA VLPEHKKEDS NIQVLTIIGQ IEGHSVQPPQ TKTTKYEHMI
PQLIDIEQND RIKGILFVLN TVGGDVEAGL AIAEMIRSLK KPTVSLVIGG GHSIGVPLAT
ASQYSFISPS ATMIIHPIRM NGLVIGVPQT FNYFNKMQER INDFIIRTSE IKLDVLKKMM
MQTDELLNDM GTILVGEEAV KCGLINEVGG VKEALDKLNS LIEAYNVEP
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