| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1929 |
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| Symbol | |
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| ID | 4202610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2165216 |
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| End bp | 2166553 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638082798 |
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| Product | putative tRNA modifying protein |
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| Protein accession | YP_696362 |
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| Protein GI | 261876147 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01125] MiaB-like tRNA modifying enzyme YliG, TIGR01125 |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCGAAAT ATAAGGTAGG AATGGTGAGT TTAGGTTGTG ATAAAAATAG AGTTGACTCA
GAAATCATGC TTGGAATGGT TCAGAATGAG TACGAACTTA CTAATAATCC AAAGGAAGCT
GACATAATAA TAGTAAATAC TTGCGGATTT ATAGAAAAGG CTAAACAAGA ATCCATAAAC
ACAATATTAG ATATGGCAAA ATATAAAACA AGTCACAACT GTAAGTTACT TATAGCTACA
GGCTGCTTAA CTCAAAGATA TGGTGATGAA TTATTAGAAT TAATGCCTGA AATAGACATA
ATGTTAGGTG TTAATGATTA TGCTAAAATA AATGAAGCCA TAATGAACTT TATAAATGGA
AATAATGAAA AAGTAAAAGC TACAAATTAC AGTGATGTAT CAATTAATGA AGGATTAAGA
CTTATAACAA CTGATAAAGC TACTGCATAC TTAAGAATTG CAGAAGGATG TGATAATTTC
TGTACTTATT GCATTATTCC TAAAATCAGA GGTAAGTTTA GAAGTAGAGC TTTAGAAAGT
ATTGTAGAAG AAGCAAAAAA ATTAGCTGAA AATGGAGTGA AAGAGTTAAT ATTAATAGCT
CAAGACACTA CTAATTATGG TATAGATATA TATGGTGAAA AGAAACTTCA CTTAGTTTTA
AGAGAATTAG CTAAGATCGA AGGAATAGAG TGGATAAGAG TTCTTTATTG TTATCCAGAG
GCTATATATG ATGAACTTAT AAAAGAGATC TCAGTAAATG ATAAGGTATG TAATTATCTT
GACTTACCTA TACAACATAT TAGTAATAAT GTTTTAAAAA GAATGGGTAG AAAAACAACA
AAAGAAGAGA TAATAGGAAA AATTAATGAC TTAAGAAAAA ATGTTCCTAA CATAGTTTTA
AGAACTTCTT TAATAGTTGG TTTCCCAGGA GAATCTTGTG AAGATTTCAA TGAATTAAAA
GATTTTATAA AAACAATAAA ATTAGATAAA GTTGGAGTAT TTACTTACTC AAGAGAAGAA
GGAACACCTG CTGCTATAAT GGAAGATCAA ATAGATGAAG AAGTTAAAAA AGCTAGGGAA
GAAGAAATAA TGTTACTTCA AAAAGAAGTA TCAGAAGAAA TTAATAAAAA CAAAGTAGGT
AGAGAATATG ATGTTCTTAT CGAAAAGTTT AATGGAGAAT ATTATATAGG AAGAAGCTAT
GAGATGGCTC CAGATATAGA TGGATGTATT TATGTGAAAG GAAATGGAGC TAAAAAGGAC
CAGTTCTGTA AAGTTAAAAT TGAAAAGGCC TTAGAATATG ATTTGGTAGG AGTTGTATGC
AATGAATCTT GCAAATAA
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| Protein sequence | MAKYKVGMVS LGCDKNRVDS EIMLGMVQNE YELTNNPKEA DIIIVNTCGF IEKAKQESIN
TILDMAKYKT SHNCKLLIAT GCLTQRYGDE LLELMPEIDI MLGVNDYAKI NEAIMNFING
NNEKVKATNY SDVSINEGLR LITTDKATAY LRIAEGCDNF CTYCIIPKIR GKFRSRALES
IVEEAKKLAE NGVKELILIA QDTTNYGIDI YGEKKLHLVL RELAKIEGIE WIRVLYCYPE
AIYDELIKEI SVNDKVCNYL DLPIQHISNN VLKRMGRKTT KEEIIGKIND LRKNVPNIVL
RTSLIVGFPG ESCEDFNELK DFIKTIKLDK VGVFTYSREE GTPAAIMEDQ IDEEVKKARE
EEIMLLQKEV SEEINKNKVG REYDVLIEKF NGEYYIGRSY EMAPDIDGCI YVKGNGAKKD
QFCKVKIEKA LEYDLVGVVC NESCK
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