Gene CPF_1928 details

Gene Information

• Locus tag: CPF_1928
• Symbol: pgsA
• ID: 4202483
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: -
• Start bp: 2164642
• End bp: 2165232
• Gene Length: 591 bp
• Protein Length: 196 aa
• Translation table: 11
• GC content: 30%
• IMG OID: 638082797
• Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
• Protein accession: YP_696361
• Protein GI: 110798824
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG0558] Phosphatidylglycerophosphate synthase
• TIGRFAM ID: [TIGR00560] CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 27
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATCTTG CAAATAAATT AACTTTAATT AGAATAATTT TAGTGCCCAT ATTCTTAGTA 
TTTATAGCTT ACCAAGACTT ACCTTATGGG AGTGTAATAG CAACACTTAT ATTCATAATA 
GCATCTGTTA CAGATCAACT AGATGGATAT ATTGCAAGAT CAAGAAATCA AGTAACTAAC 
TTTGGTAAGT TTATGGACCC TTTGGCAGAT AAGCTACTAG TTACAGCAGC ACTTATATCT 
TTAGTTGAAT TACAATTAGT TCCTGCATGG GCAGCTATTG TAATAATAGC TAGAGAGTTT 
GCTGTTTCAG GTTTAAGAAC CATAGCTGCA TCAGAGGGGT TAGTTATAGC TGCTAGCTGG 
TGGGGAAAAA TTAAAACTGT AATACAAATA ATTGCCATAG TGCTTTTATT ATTACAAGTA 
AATATAATTA ATTCACCAGG AATTAAGGAA TTAGTTGCAG GCAGCAGCTT TTTAAGAAAT 
TTCTTTATAT ATGTTCCAGA TATATTCTTA TATTTAGCTG TTGCAATAAC AATAATTTCT 
GGAGTAGATT ACTTTAGAAA AAATAAAAAT GTTATAAATA CTTATAAATA A 

 

Protein sequence

MNLANKLTLI RIILVPIFLV FIAYQDLPYG SVIATLIFII ASVTDQLDGY IARSRNQVTN 
FGKFMDPLAD KLLVTAALIS LVELQLVPAW AAIVIIAREF AVSGLRTIAA SEGLVIAASW 
WGKIKTVIQI IAIVLLLLQV NIINSPGIKE LVAGSSFLRN FFIYVPDIFL YLAVAITIIS 
GVDYFRKNKN VINTYK