Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1924 |
Symbol | aspB |
ID | 4202426 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2159741 |
End bp | 2160934 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 638082793 |
Product | aspartate aminotransferase |
Protein accession | YP_696357 |
Protein GI | 110798729 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATATTAT CTAGAAAAGC ACAAAATATA GGGGCATCAC TAACTTTAGC CTTAACAGCT AAAGCAGGTG AATTAAAAAA AGAAGGAATA GATGTAGTAA GCTTTGGAGT AGGTGAGCCT GATTTTAATA CACCTAAGAA TATAATAGAA GCTGCCACTA GAGCTATGGA AGAAGGAAAT ACAAAATACA CAGCCACATC TGGAATAGTA GAGTTAAAAG AGGTCATAGC AAAGAAATTA CATGATGATA ATGGACTTAA CTATGGAACT AAAAATATAA TTATTTCAAC AGGAGCTAAA CAATCTTTAG CTAATGTATT TATGGCGATT TTAAATCCAG GAGATGAGGT TATAATACCA GTACCATATT GGGTAAGTTA TCCTGAGCTA GTTAAATTAA GTGATGGAGT TCCTGTTTTT ATAGAAACAA AAAAAGAAAA TGATTTTAAG GTTACTTATG ACGAATTAAA ATCAGTTTTA AGTAAAAATA CAAAGGCAAT AGTAATAAAT TCACCAAATA ATCCAACAGG AACAGTATAT TCAAAAAAAG ATTTAGAAGT TATTGCGAAA TTTGCTGAGG AAAATGATCT TATAATAATT TCTGATGAAA TATATGAAAA ACTTATATAT GGAAAAGAAG AGCATATAAG TATTGCTTCC TTAAGTGAAG ATGCCTTCAA GAGAACAGTA GTTATAAATG GATTTTCTAA GGCTTATGCA ATGACTGGAT GGAGAATTGG ATATGCAGCT TGTTATAATG AAGAGCTAAT TAAGGTAATG AACAATGTTC AAAGTCATAT GACATCAAAT ACAAATAGTA TAGCTCAATT TGCTGCCTTA GAAGCCTTAA ATGGAGATCA AGAAACTATA AAGAATATGG TTAAGGAATT TAGTTTAAGA AGAGAGCTTA TGATAGAGCT TATAAGTGAA ATTGAAGATC TTACTTTTAT AGAGCCAAAG GGTGCCTTTT ATGTAATGAT TGATGTGTCT AAGGTTCTAA AAAAAGCTAA TATAAAGGGT TCAATGGAAT TTGCAAATCT ATTACTAAAA GAGGAAAATG TTGTTGTAAT ACCTGGAATA GCTTTTGGGG AAGATAATTT TATAAGACTA TCTTATGCTA CATCTAAAGA GGAAATAATT AAGGGCTTAA AAAGAATAAA AGAATTTGTT AATAAACTTA TGAATAGGGA TTAA
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Protein sequence | MILSRKAQNI GASLTLALTA KAGELKKEGI DVVSFGVGEP DFNTPKNIIE AATRAMEEGN TKYTATSGIV ELKEVIAKKL HDDNGLNYGT KNIIISTGAK QSLANVFMAI LNPGDEVIIP VPYWVSYPEL VKLSDGVPVF IETKKENDFK VTYDELKSVL SKNTKAIVIN SPNNPTGTVY SKKDLEVIAK FAEENDLIII SDEIYEKLIY GKEEHISIAS LSEDAFKRTV VINGFSKAYA MTGWRIGYAA CYNEELIKVM NNVQSHMTSN TNSIAQFAAL EALNGDQETI KNMVKEFSLR RELMIELISE IEDLTFIEPK GAFYVMIDVS KVLKKANIKG SMEFANLLLK EENVVVIPGI AFGEDNFIRL SYATSKEEII KGLKRIKEFV NKLMNRD
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