Gene CPF_1924 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1924 
SymbolaspB 
ID4202426 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2159741 
End bp2160934 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content30% 
IMG OID638082793 
Productaspartate aminotransferase 
Protein accessionYP_696357 
Protein GI110798729 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATATTAT CTAGAAAAGC ACAAAATATA GGGGCATCAC TAACTTTAGC CTTAACAGCT 
AAAGCAGGTG AATTAAAAAA AGAAGGAATA GATGTAGTAA GCTTTGGAGT AGGTGAGCCT
GATTTTAATA CACCTAAGAA TATAATAGAA GCTGCCACTA GAGCTATGGA AGAAGGAAAT
ACAAAATACA CAGCCACATC TGGAATAGTA GAGTTAAAAG AGGTCATAGC AAAGAAATTA
CATGATGATA ATGGACTTAA CTATGGAACT AAAAATATAA TTATTTCAAC AGGAGCTAAA
CAATCTTTAG CTAATGTATT TATGGCGATT TTAAATCCAG GAGATGAGGT TATAATACCA
GTACCATATT GGGTAAGTTA TCCTGAGCTA GTTAAATTAA GTGATGGAGT TCCTGTTTTT
ATAGAAACAA AAAAAGAAAA TGATTTTAAG GTTACTTATG ACGAATTAAA ATCAGTTTTA
AGTAAAAATA CAAAGGCAAT AGTAATAAAT TCACCAAATA ATCCAACAGG AACAGTATAT
TCAAAAAAAG ATTTAGAAGT TATTGCGAAA TTTGCTGAGG AAAATGATCT TATAATAATT
TCTGATGAAA TATATGAAAA ACTTATATAT GGAAAAGAAG AGCATATAAG TATTGCTTCC
TTAAGTGAAG ATGCCTTCAA GAGAACAGTA GTTATAAATG GATTTTCTAA GGCTTATGCA
ATGACTGGAT GGAGAATTGG ATATGCAGCT TGTTATAATG AAGAGCTAAT TAAGGTAATG
AACAATGTTC AAAGTCATAT GACATCAAAT ACAAATAGTA TAGCTCAATT TGCTGCCTTA
GAAGCCTTAA ATGGAGATCA AGAAACTATA AAGAATATGG TTAAGGAATT TAGTTTAAGA
AGAGAGCTTA TGATAGAGCT TATAAGTGAA ATTGAAGATC TTACTTTTAT AGAGCCAAAG
GGTGCCTTTT ATGTAATGAT TGATGTGTCT AAGGTTCTAA AAAAAGCTAA TATAAAGGGT
TCAATGGAAT TTGCAAATCT ATTACTAAAA GAGGAAAATG TTGTTGTAAT ACCTGGAATA
GCTTTTGGGG AAGATAATTT TATAAGACTA TCTTATGCTA CATCTAAAGA GGAAATAATT
AAGGGCTTAA AAAGAATAAA AGAATTTGTT AATAAACTTA TGAATAGGGA TTAA
 
Protein sequence
MILSRKAQNI GASLTLALTA KAGELKKEGI DVVSFGVGEP DFNTPKNIIE AATRAMEEGN 
TKYTATSGIV ELKEVIAKKL HDDNGLNYGT KNIIISTGAK QSLANVFMAI LNPGDEVIIP
VPYWVSYPEL VKLSDGVPVF IETKKENDFK VTYDELKSVL SKNTKAIVIN SPNNPTGTVY
SKKDLEVIAK FAEENDLIII SDEIYEKLIY GKEEHISIAS LSEDAFKRTV VINGFSKAYA
MTGWRIGYAA CYNEELIKVM NNVQSHMTSN TNSIAQFAAL EALNGDQETI KNMVKEFSLR
RELMIELISE IEDLTFIEPK GAFYVMIDVS KVLKKANIKG SMEFANLLLK EENVVVIPGI
AFGEDNFIRL SYATSKEEII KGLKRIKEFV NKLMNRD