Gene CPF_1918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1918 
Symbol 
ID4202263 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand- 
Start bp2154028 
End bp2154648 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content28% 
IMG OID638082787 
ProductM50 family peptidase 
Protein accessionYP_696351 
Protein GI110799013 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0658548 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAATTTT TATTAGATGC GTTTCTTAGT ATTCCAGCAA TATTAATAGC TTTTTCAGTA 
AAAGAGTATA CTCGTGCTAA AATGGCAGAT AAATTAGGAG ATAAATCACC AAGGTTTAAA 
GGGGAATTAA CCTTAGATCC ATTAAAGCAT GTTGATATAG CTGGTGCCTT AATGATGGCT 
TTCTTTGGAT TTGGTTGGAG TAAATCTGTA GAGATAAATA AATATGCATT TAAAAATCCA 
AAGAAGGATG CTCTTAAAGT TAACATAGCT GCATGGCTTT CAAACTTAGT TGTTGCCATA 
ATTGGAGTAA TACTTACAAG TTTATACTTA AGATTTTTTG GTTTAAGAGG AGATCTTTCT 
CAAATTATAT TTTTAATGTT ACAATATATA ATAATATTAA ATGTAAACTT CTTTGTATTT 
AATATATTAC CACTTCCAGG ACTTGACTGT TTTAGAATTT TAGAGGATCT TAAGCCTCAA 
TTATTCTATA AGTTATCTGG AATAGTATAT CAATATTATT ACCCTATACT TATAGTTATA 
ATACTTCTTG GAAGATATGT ATTAGCTATA CCATCTCAAT TGGTTATGGC TTTTGTATAT 
TCTATAGGTT TATTTATTTA A
 
Protein sequence
MQFLLDAFLS IPAILIAFSV KEYTRAKMAD KLGDKSPRFK GELTLDPLKH VDIAGALMMA 
FFGFGWSKSV EINKYAFKNP KKDALKVNIA AWLSNLVVAI IGVILTSLYL RFFGLRGDLS 
QIIFLMLQYI IILNVNFFVF NILPLPGLDC FRILEDLKPQ LFYKLSGIVY QYYYPILIVI 
ILLGRYVLAI PSQLVMAFVY SIGLFI