| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1915 |
|---|
| Symbol | argS |
|---|
| ID | 4202734 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2148863 |
|---|
| End bp | 2150560 |
|---|
| Gene Length | 1698 bp |
|---|
| Protein Length | 565 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 638082784 |
|---|
| Product | arginyl-tRNA synthetase |
|---|
| Protein accession | YP_696348 |
|---|
| Protein GI | 110798607 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0018] Arginyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00456] arginyl-tRNA synthetase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00499149 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTACA AAAAGTTAGT TGCAGAAAGA ATTAAAGAAC ATGTTGATCT AGAATTAGAA
AACATAGAAA AACTTATAGA AATACCACCT AAGCCAGAAA TGGGAGATTT TGCATTCCCT
TGCTTCCAAT TAGCAAAGGT TATGAGAAAA GCTCCTAATA TGATAGCAGC TGAATTAGCT
GAAAAGATAA ATAAAGAGGG ATTTGAAAGA GTAGAGTGTT TAGGATCTTA CTTAAACTTC
TTTGTTGATA AAGTAGCTTT CTCAAAAAAT ATAATAAGCA AAGTTTTAGA AGAAGGAGAT
AAATATGGTT CTTCTAAAAT AGGAGAGGGA AAAAATGTTG TAGTTGAATA TTCATCACCT
AACATAGCTA AGCCTTTCCA CGTTGGACAT TTATTCACAA CAGCTATAGG ACATTCATTA
TATAGAATGT TAAACTTTGA AGGATATAAT CCAATAAGAA TAAATCACTT AGGAGACTGG
GGAACTCAGT TTGGTAAGTT AATCTCAGCT TATAAAAGAT GGGGAAATGA AGAAGCTTTA
GAAGAGGCTC CAATAAATGA GCTTTTAAGA ATATATGTTA AATTCCATGA TGAAGCTGAA
AATAATCCAG AACTTGAAGA TGAAGGAAGA ATGTACTTTA AGAAGCTTGA AGATGGGGAT
CAAGAAGCTG TAGCTCTATG GGAAAGATTT AAAGACTTAT CTTTAAAAGA ATTTAATAAG
ATATATGATA TGTTAGGCGT AGATTTCGAT TCTTGGGCTG GAGAAAGCTT CTATAATGAT
AAGATGGATA CAGTAGTAGA AGAATTAGAA AAGGCTAATA TATTAACTGA GAGTAATGGG
GCTAAGGTTG TAATGTTAGA TGAATACAAT ATGCCACCTT GTATAGTTGT TAAATCAGAT
GGAGCATCAA TATATGCTAC AAGAGACTTA GCAGCAGCTA GTTATAGACA TAAAACATAT
AACTTTGATA AATGTATATA TGTAGTTGGT AAAGACCAAA TATTACACTT TAACCAAGTA
TTCAAAACAT TAGAATTAGC AGGTAATGAA TGGGCTAAAA ACTGTGTACA CATTCCATTT
GGATTAGTTA AGTTCGCAGA TAGAAAGCTT TCAACAAGAA AAGGTAATGT AGTTTTACTT
GAAGACTTAT TAAACGAAGC TATAGATAAA ACAAGAGAAA CTATAGAAGA AAAGAACCCA
CAATTAGAAA ATAAAGAGGA AGTAGCTAAG AAAATAGGTA TAGGAGCTAT ATTATTTACT
TACTTAAAGA ACTCAAGAGA AAGAGATATA GTTTTTGATT GGAAAGAGAT GTTAAGCTTT
GATGGAGAAA CTGGTCCATA TGTTCAATAC TCATATGCAA GAGCTAAGAG TATATTAAGA
AAAGCTGAAG AACAAAACAT AACAGCTGAG CCAGATTTCA CAAAGTTAAC TTCAAAAGAA
GAGTTTGAAT TAGCTAAAAC TCTAGAAGGA TTACAAAAGG CTGTAATTTT AGGAATAGAT
AAGTTAGAAC CTTCAGTTGT AACTAGATAT TCAATAGAAG TAGCTAAGGC TTTCAATAAA
TTCTACAATA ATCACACAGT TTTAAATGTA GAAGATGAAG GATTAAAGGC TGCAAGACTT
GAACTTATAA AAGCTACTGC TCAAGTTATT AAAAATGCTT TATTCTTAAT AGGAATAGAT
GTAGTTGAAA AAATGTAA
|
|---|
| Protein sequence | MDYKKLVAER IKEHVDLELE NIEKLIEIPP KPEMGDFAFP CFQLAKVMRK APNMIAAELA
EKINKEGFER VECLGSYLNF FVDKVAFSKN IISKVLEEGD KYGSSKIGEG KNVVVEYSSP
NIAKPFHVGH LFTTAIGHSL YRMLNFEGYN PIRINHLGDW GTQFGKLISA YKRWGNEEAL
EEAPINELLR IYVKFHDEAE NNPELEDEGR MYFKKLEDGD QEAVALWERF KDLSLKEFNK
IYDMLGVDFD SWAGESFYND KMDTVVEELE KANILTESNG AKVVMLDEYN MPPCIVVKSD
GASIYATRDL AAASYRHKTY NFDKCIYVVG KDQILHFNQV FKTLELAGNE WAKNCVHIPF
GLVKFADRKL STRKGNVVLL EDLLNEAIDK TRETIEEKNP QLENKEEVAK KIGIGAILFT
YLKNSRERDI VFDWKEMLSF DGETGPYVQY SYARAKSILR KAEEQNITAE PDFTKLTSKE
EFELAKTLEG LQKAVILGID KLEPSVVTRY SIEVAKAFNK FYNNHTVLNV EDEGLKAARL
ELIKATAQVI KNALFLIGID VVEKM
|
|---|
| |