Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1910 |
Symbol | |
ID | 4201850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | + |
Start bp | 2144855 |
End bp | 2145709 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 638082779 |
Product | metallo-beta-lactamase family protein |
Protein accession | YP_696343 |
Protein GI | 110800263 |
COG category | [R] General function prediction only |
COG ID | [COG2333] Predicted hydrolase (metallo-beta-lactamase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.404298 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAATCA CCTCTAAAAA AGTTAGTTTA TTTTTAATAT TTATACTAGT AACATCAATA TTTTTATATT CTACTTCATA TTCAATTCCA AATGAAAATT TTACAGTCCA TTATATAGAT GTAGGACAGG GAGATTCTGC TTTAATTCAA AGCAATGGTA AAAATCTTTT AATAGACGCA GGTACTCCTG AATCTACTAA TTCTCTAGTA AAATATTTAA AAAACCTTGG AATTAAAAAG CTTGATTTTA TAATAGCTAC TCATCCCCAT GCAGATCATA TTGGCGGTAT GGAATCTATT ATTAAAAAAT TTGATGTAGA CTATTTTTGT GCACCAAAAG TTACAGAAAA TACTGATGTA TTTAAAGGCA TGGTAACTGC ACTAAAAGAA AAGGATATTA ATATAAATAC CCTATCTAAA TCAAAATCTC TTCCTATAGA TTTAGGTGAG AACACTAAAA TAGAAGTCTA TTCTCCTTCT AATAAAGAGT ATGGAAACCT AAATAACTAC TCACCTATCC TTAAGATATA TTATGGTGAA ACCTCCTTTT TGTTTACTGG AGATGCAGAG ACTGAAGCAG AAATGGAAGC TGTTAAATCA AATGAAAATT TAAAGTCAGA TGTGTTAAAG GTAGGACATC ATGGAAGTAC AACTTCTTCA ACAGATTCCT TTTTAAAAGA AGTTTCTCCT AAAATAGCTG TAATTTCTTC AGGGCTAGAT AATTCATATG GACATCCAGC AAAAGAAACC CTAAAAAAAT TATCTTCCTA TAAAACTAAG GTTTTTAGAA CAGATGAAGA TGGAACTATT ATTTTAACCT CTGATGGAAA ATCTATAAAA AAGCATAAAA ACTAA
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Protein sequence | MKITSKKVSL FLIFILVTSI FLYSTSYSIP NENFTVHYID VGQGDSALIQ SNGKNLLIDA GTPESTNSLV KYLKNLGIKK LDFIIATHPH ADHIGGMESI IKKFDVDYFC APKVTENTDV FKGMVTALKE KDININTLSK SKSLPIDLGE NTKIEVYSPS NKEYGNLNNY SPILKIYYGE TSFLFTGDAE TEAEMEAVKS NENLKSDVLK VGHHGSTTSS TDSFLKEVSP KIAVISSGLD NSYGHPAKET LKKLSSYKTK VFRTDEDGTI ILTSDGKSIK KHKN
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