Gene CPF_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1906 
Symbol 
ID4202888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2142083 
End bp2142553 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content29% 
IMG OID638082775 
ProductAsnC family transcriptional regulator 
Protein accessionYP_696339 
Protein GI110800536 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.424603 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTTTAA TAAACACATC AACTCATTTA GATGAATTAG ATTTACAAAT TTTAGATATC 
CTAATTAAAG ATTGCAGAAC TCCTTACTTA GAGATAGCAA GAATATGCCA CGTTTCAGGT
GGTACAATCC ATGTTAGAAT GAAAAAGATG GAAGACTTAG GAATTATAAA AGGTACTAGA
ATACTTTTAA ATTTACCTAA ATTAGGCTAT GATGTTACAT GCTTCGTTGG TATTCATGTT
AACTCAACTT CATCATACAC TCATGTTTTT GATGAACTTT CAAAAATTAA AGAAGTAGTT
GAAATTCATT TAATAACTGG GGGTTATGCT ATTTTTGCTA AGGTTATTTG CAAGAGCATA
TCAGATCTTC AAGATATTTT AATGAACAAA ATTAATCATA TTGAAGGAAT AAGCGGAACT
GATACATTTA TATCTCTATC TCAACCAATA GATAGAAATA TAACCCTTTA A
 
Protein sequence
MSLINTSTHL DELDLQILDI LIKDCRTPYL EIARICHVSG GTIHVRMKKM EDLGIIKGTR 
ILLNLPKLGY DVTCFVGIHV NSTSSYTHVF DELSKIKEVV EIHLITGGYA IFAKVICKSI
SDLQDILMNK INHIEGISGT DTFISLSQPI DRNITL