Gene CPF_1903 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCPF_1903 
Symbol 
ID4203777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameClostridium perfringens ATCC 13124 
KingdomBacteria 
Replicon accessionNC_008261 
Strand
Start bp2139732 
End bp2140235 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content32% 
IMG OID638082772 
Producthexapeptide repeat-containing transferase 
Protein accessionYP_696336 
Protein GI110800070 
COG category[R] General function prediction only 
COG ID[COG0663] Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000422346 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTAATTG AAATTAGAGG AAAGAAGCCT GAAATAGGGG AAAAAACATT TATAGCTCAC 
AGTAGTGATA TCATTGGTGA TGTTACTATA GGAAGAGATT GTGGAATTTG GTTTGGATCT
GTAATAAGAG GAGACGATAA TTTAATTAAA ATAGGAAATG AAACCAATGT ACAAGATAAT
GCAGTATTAC ATGTTGATAA GGAGCACACT ATTGAAATTG GGAGTGGTGT TACTATAGGA
CATGGTGCTA TAATACATGG GTGTAAGATA GAGGATGAAT GCTTAATTGG TATGGGAGCA
ATAATACTAA ATGGAGCAAA AATAGGAAAA AATACTATGA TTGCTGCAGG AACTTTAGTA
AGTCAAAACA AGGAAATACC AGAGGGCGTA TTAGTCATGG GAGTTCCAGG AAAGGTTGTT
AGAAAACTTA CTGAGGATGA AATTGAAAGT ATAAAAAATT CAAGAAGAGA ATATGTAAAG
ATGAAAAATC TTTATATTAA ATAA
 
Protein sequence
MLIEIRGKKP EIGEKTFIAH SSDIIGDVTI GRDCGIWFGS VIRGDDNLIK IGNETNVQDN 
AVLHVDKEHT IEIGSGVTIG HGAIIHGCKI EDECLIGMGA IILNGAKIGK NTMIAAGTLV
SQNKEIPEGV LVMGVPGKVV RKLTEDEIES IKNSRREYVK MKNLYIK