Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPF_1895 |
Symbol | |
ID | 4201195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens ATCC 13124 |
Kingdom | Bacteria |
Replicon accession | NC_008261 |
Strand | - |
Start bp | 2130044 |
End bp | 2131993 |
Gene Length | 1950 bp |
Protein Length | 649 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 638082764 |
Product | V-type ATP synthase subunit I |
Protein accession | YP_696328 |
Protein GI | 110799711 |
COG category | [C] Energy production and conversion |
COG ID | [COG1269] Archaeal/vacuolar-type H+-ATPase subunit I |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAATAG TTAAGATGAA TAAATTCACC TTACTTGCCT TTGAATCAGA GAAAGAAAAG CTTCTTAAAA AAATTCAAAG TTCTTCAGAA GTTGAGTTCA TAAACTTACA AGATGAAGAA AAAGTGGAAG GCAATGAAGT CTTTGAATCT CTTAGCAAAG ATGATTTAGA TGCTGAAACA ACTCTTATAG AAGAAAATGT TTCAAAAACA AGATCAGCTT TAGACTTCTT AAAAGAGTTT GTTGCTGAAG TTGGAGGACT TAAGGCTTTA AAAGCTGGTA AAGAAAGCTT AACTTTGGAT GAGCTAGAAG TAAAGGTTGA AAATAGCAAC TGGGAAGTCG TTTATTCAGA GGTTAAGAAA ATGGAGAGAG AGCTTGCTAC TCTAGAAAAC GAAAAGACAA AACTTTTAGG TGAAATAGAA ATCTTAGAGC CATGGCAAAG TTTCGATGCT CCACTAGGTG AATTAAATAA TTTTGAAAAA GTAGTTGCGT TCTTAGGTGT GATTTCAAGT CAAAACCTTG AAAACATGAA GAACGAAATT GAAAGCGAAT TCAAGGAAAG TTATATAGAA GTTATTTCTA ACACTGACCA AGATTCATAT GTCTTTGTAA TGACAATGAA AGAAAGAGCT GAAGAAATGG ACGAAGTTTT AAAGAACTTT GGTTTTTCAG CGTTCCAAAC TAAGTACAAA GAAAAAGCTT CAGTTCTTGT TGAAGAGTTT AAATTAAAGA TACAAGAAAT CGAAGCTCAA AAATCAGACT TAAAAGGAGT ACTTTCAAAT TACAGAGAAG AAAAGAGAAC TTTAGAACTA GCTTATGAAT ATTACAGCAA CATACTTCTT AGAAAAGAAG CAAGTGAAAA CTTCTTAAAA ACAGATAAAG TAGTTGTTAT TCAAGGTTGG GTTCCTAAAA ATGATAATTC TTCTTTAGAA GGAATCATTC AAAGTTCAGT AGGAGATATG TATTATCTTG AGTTTGAAGA AGTTAAGGAA GAAGAGGTTG CAGAAGTTCC AGTTAAATTA CACAATAAGG GACCAGCAGC AGCTTTCGAT TCAATAACAG AAATGTATAG CTTACCAAGA TATGATGAAA TAGACCCTAC ACCACTTTTA ACACCTTTCT ACCTAGTATT CTTCGGCATG ATGGTTGCAG ATTTAGGATA CGGACTAGTA TTATTTGTAG GATCACTATT AGCTATGAAA TTACTTAATT TAGATGAGGC ACAAGAAAAG TTTGCTAAAT TCTTTATGTA TTTAAGTATA GCTACAACTA TTGCAGGTGC AGTATTTGGT ACTGCCTTTG GATTTGAATT GAAATCTATA GGACTTATAA ATCCAAGTAA AGATACCAAC TTGTTACTAA TTTTATCAGT TGGATTTGGG GTTATTCAAA TATTCTTTGG ATTATTTATA AAAGCGTACA TGTTAATCAG AGATAAGCAA TATTTATATG CTTTATTTGA TGTAGGATCA TGGATTATGC TTTTAATAGG TCTTCCAATG ATATTCTTTG ATGGTCCTAT AAGCTTAGTA GGTAAAGTAT TATCAATAGT AGGTTCAATA TTAATAATCT TAACACAAGG TAGAGATGAA GAAACAAAAG GTGCTCAAAT AGGTCAAGGT TTATATGCCT TATACGGTAT AACAGGATAC GTAGGAGACT TAGTATCATA TACAAGACTT ATGGCTTTAG GTATTGCAGG TGGATCAATA GCAGCTGCAC TTAACTTAAT AATAGGTATG TTCCCAGGAA TAGCAGTTAT AATTGTAGGA CCTCTATTCT TTATAGCAGC TCATACATTT AACATGCTTT TATCATTACT TGGAGCATAT GTTCATACAG CGAGATTACA GTACGTTGAG TACTTCTCAA AATTCTATGA AGGTGGCGGA AAAGCATTCA CACCATTTAG AACAATAAAT AAATTCATAA CAATAAAAAG AAATAAATAA
|
Protein sequence | MAIVKMNKFT LLAFESEKEK LLKKIQSSSE VEFINLQDEE KVEGNEVFES LSKDDLDAET TLIEENVSKT RSALDFLKEF VAEVGGLKAL KAGKESLTLD ELEVKVENSN WEVVYSEVKK MERELATLEN EKTKLLGEIE ILEPWQSFDA PLGELNNFEK VVAFLGVISS QNLENMKNEI ESEFKESYIE VISNTDQDSY VFVMTMKERA EEMDEVLKNF GFSAFQTKYK EKASVLVEEF KLKIQEIEAQ KSDLKGVLSN YREEKRTLEL AYEYYSNILL RKEASENFLK TDKVVVIQGW VPKNDNSSLE GIIQSSVGDM YYLEFEEVKE EEVAEVPVKL HNKGPAAAFD SITEMYSLPR YDEIDPTPLL TPFYLVFFGM MVADLGYGLV LFVGSLLAMK LLNLDEAQEK FAKFFMYLSI ATTIAGAVFG TAFGFELKSI GLINPSKDTN LLLILSVGFG VIQIFFGLFI KAYMLIRDKQ YLYALFDVGS WIMLLIGLPM IFFDGPISLV GKVLSIVGSI LIILTQGRDE ETKGAQIGQG LYALYGITGY VGDLVSYTRL MALGIAGGSI AAALNLIIGM FPGIAVIIVG PLFFIAAHTF NMLLSLLGAY VHTARLQYVE YFSKFYEGGG KAFTPFRTIN KFITIKRNK
|
| |