| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1883 |
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| Symbol | rbsD |
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| ID | 4203336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2119749 |
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| End bp | 2120144 |
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| Gene Length | 396 bp |
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| Protein Length | 131 aa |
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| Translation table | 11 |
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| GC content | 29% |
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| IMG OID | 638082752 |
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| Product | D-ribose pyranase |
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| Protein accession | YP_696316 |
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| Protein GI | 110800947 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1869] ABC-type ribose transport system, auxiliary component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.000575417 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGAAAAA CAAGTTTATT AAATAGTAAC ATAAGTTCAG TCATATCAAA GATGGGACAT
ACTGATATGT TGGCTATAGG GGATTGTGGA TTACCTATAC CAAAGGAAAC TGAGAGAATA
GACTTAGCTT TAATAAAAGG CGTACCAGGC TTTATAGAAA CTTTAAAAGC TATTTTAGAA
GAATTACAAG TAGAAGAGGT ACTTATTGCT AAGGAAACAG AAAAGGTAAG TCCAGAATTA
TTTACAGAAA TAAAAGAGAT TATAAAAGAT ACTAAAATAA CTTTTATATC ACATGAGGAA
TTAAAGAAAG AATTAAAAGA TTGTAAGGCA GTTGTTAGAA CTGGAGAACA AACTCCATAT
GCAAATATAA TCTTAAAATC AGGGGTTGTT TTTTAA
|
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| Protein sequence | MRKTSLLNSN ISSVISKMGH TDMLAIGDCG LPIPKETERI DLALIKGVPG FIETLKAILE
ELQVEEVLIA KETEKVSPEL FTEIKEIIKD TKITFISHEE LKKELKDCKA VVRTGEQTPY
ANIILKSGVV F
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