| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1881 |
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| Symbol | rbsC |
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| ID | 4202177 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2117207 |
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| End bp | 2118142 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 638082750 |
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| Product | ribose ABC transporter, permease protein |
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| Protein accession | YP_696314 |
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| Protein GI | 110798946 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | [TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0277317 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGCGA ATGTTAAAGC AAATATATCT AAATATAAAT CTCTTATAGG ACTAGTATTA
TTATGTATAG TTATTACTAT AGTTACTCCA AACTTTTTAA GTGTATCTAA TATAACTAAC
GTATTTACAC AGGTTTCAGT TAATGCAATC ATAGCAATAG GTATGACTTT CGTAATTTTA
ACTGGTGGAA TAGACTTATC AGTTGGATCT ACTTTAGCTA TTAGTGGTGC CGTAGGGGCT
TCTATTGTTA AGTCAACTGG AAACGTATTC TTAGCAATTA TAGTGGCAGC TGTTATTGGT
ATAGCAGTTG GATTAATAAA TGGTTTATTA GTATCAAAAG GAAAACTACA AGCATTCATA
GTTACTTTAG CTACAATGAC AATATTTAGA GGAGCTACTT TAGTATTTAC AGATGGTACT
CCAATATCAA AATTACCTGA AGCTTTTGTT AAAATAGGAA ATGGTAAACT TGGATTTATG
CCAATACCAG TTATAATAAC AATAATAATA GCAATCATAG CAGTATATGC TTTATCACAA
ACAAGATTTG GAAGATATTT ATATGCTTTA GGTGGAAATG AAGATGCTTC AAGATTATCA
GGAATAAATA CAGATAAGAT AAAAACTTTA GTTTATGTAG TATCAGGTTT TGCCTCAGCT
ATTGCAGGGG TAATAATAAC AAGTAGAATA GGATCTGCTT CACCTAATGC AGGAACAGGA
TTTGAATTAG ATGCTATCGC TGCTGTAGTA ATAGGAGGAA CTTCTTTAGC AGGGGGAGAA
GGAACAATTA CAGGTACTTT AATAGGTGCT CTTATTATAG GTGTACTTAA TAATGGATTA
AACCTTATGA ATGTATCACC ATTCTATCAA TCAATAGTAA AAGGTTTAGT TATATTAATA
GCAGTACTTT TAGATAAAAA GAGCAGAAAA AATTAA
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| Protein sequence | MKANVKANIS KYKSLIGLVL LCIVITIVTP NFLSVSNITN VFTQVSVNAI IAIGMTFVIL
TGGIDLSVGS TLAISGAVGA SIVKSTGNVF LAIIVAAVIG IAVGLINGLL VSKGKLQAFI
VTLATMTIFR GATLVFTDGT PISKLPEAFV KIGNGKLGFM PIPVIITIII AIIAVYALSQ
TRFGRYLYAL GGNEDASRLS GINTDKIKTL VYVVSGFASA IAGVIITSRI GSASPNAGTG
FELDAIAAVV IGGTSLAGGE GTITGTLIGA LIIGVLNNGL NLMNVSPFYQ SIVKGLVILI
AVLLDKKSRK N
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