Gene CPF_1877 details

Gene Information

• Locus tag: CPF_1877
• ID: 4203485
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Clostridium perfringens ATCC 13124
• Kingdom: Bacteria
• Replicon accession: NC_008261
• Strand: +
• Start bp: 2109948
• End bp: 2111873
• Gene Length: 1926 bp
• Protein Length: 641 aa
• Translation table: 11
• GC content: 25%
• IMG OID: 638082747
• Product: hypothetical protein
• Protein accession: YP_696311
• Protein GI: 110801404
• COG category: [S] Function unknown
• COG ID: [COG1289] Predicted membrane protein

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.044001
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATTGATA AAGTTATAAA GAAATACAAT TTAGATGTGG ATTCAATGAA ACGTGAAGGG 
ACAATTGCCT GTTTAACATT TTTAGCCTCT TGGATATTCT TTGGAATAAA TAATGCAATC 
TTAGCATATC CAATAGCTTT AACCTCCTCA ATTCTTTTAA AAGAAAATTT TAAAATAAAT 
CCCTTAGAAA AAACTATACG ACTTTTATTT TTATATTGTT TTATAGTTGT TCTGTCTTTT 
TTAGCATCAA ACCATTTTTT ATTAGGAATT ATAATAAACT TCTTCACCAT ATTTTTCATA 
GCTTATAAGC TCTCAGTTGC CTACACTCCT TTATTATACA AACCATTCTT AATGTTATAT 
GTATTTACTT ATTTTTATAA GGTAGACTTT CAAGGCTTAC CTAGAAGATT ATTATCTATT 
TTCTTTGGCT TTAGTTTAAT AATAATCTTT CACTTATTTT TAAACAAGCT AAGTTATAAA 
TCCTTAATAA AAGATAACAT AAATAAATCT TTATTTTTAT TGGAAAACCA AGTAGATAAC 
CTTATTTTTA AAAGTTATAA TTCAGATTTG CAGCAATCTA TCTCTAAAGA ACTTACTACT 
ATTTGTTATA ACCTTTATAC TACAAGAAAG AGAAAAATTT TAACTAATAA CTTAGGTAGT 
ATTCAATTTA AAATATATAT AATATTAGAA AACTTAAACT TAGATCTATA TAATCTAAAT 
AAGCTATACT CAAAACTTAA TTACAATAGT GCCCTAATTA AATCATTTTT AAAGGAATTA 
AAAAAATCTA TAAATATTTT AAGATTATAT TTAAATGATG AGATTTCTTA TTATGAAATA 
GATAAACAAC TAAATAGATT AAATAGGTTT CATGAAGATT TACCTGATCA GTTCACTTTT 
TTTCATGACT TATCTATTTC AGTAACCAAT CTTTATTTAT ATTTAGCTGA CATGACTACT 
CTTGAAGAGG GTGAAGGATA CAAAAGCTAT GATTTATGGA AAAATACAGA TAAAAACCAA 
TTTAAATTTA GAGATTCTCT ACATTTTGGT ACAATAAAAC TTAATTTTGC CCTAAGGATT 
TCTTTAACCT TAAGTCTTGT TTTACTTCTT AGCTATCTAT TTGATTTTAC TAAAATGAGT 
TGGCTTGGAA TAACTATAAT GTCAATAATG CAACCTTATT ATGAAGAGAC CTTAAATAAA 
AGTAAAGACA GATTAAAGGG TAATCTTTTA GCTATTTTTC TTGTAATTAT TATTTTAAAC 
TTGTTTCAAA GCCAAGTTGT GCATATTATT GTATTAGTTT GTAGCCTGTA TCTAACCTAT 
GGATTTAAAA GCTATTATAA GCTCTCTCTC TTTACTGCCA TCTCTGCTAT TTGCATGGCA 
TCTCTTAGCT ATGGAGTTAA TACCTTAGCT ATTTTTAGAG TTTTTTATTT AGCTTTAGGT 
ATATTAATAA CCTTCTTAGC TAATAAATTT TTATTTCCTT ATAACTTAGA TCAAGGGCTA 
AAGGAATTAA GCCTTAAATT AATAAAATAT GTAAATATAT TAGCAGAAGA TCTAATAAAA 
AATCCTTCAA AAAATGAAGA GGAAATAATA AACTTAACCA TCCATATAAA GCTCATGTGT 
AACAAGCTTA CACTTAGAAA TATTCAAAAA AAAGATAAGG ATATAAATAG GTTAATACTC 
TTAACTGAAA ATCTTACTGC TTCTTTAAGC TATTATACTC TTTTAAAAAA AGATTTAGGA 
TTGGTATGTG GAATAAATAA AGATGAGTTA ATTAAACTTC AAAGTAAATT ACAATATTCC 
CTTAAAGAAA AGGTGCCATT AATAGATATA ATAAACCTAT TAGATTCAAC AGTTGATTCC 
CTTATTAATT GTCCTTACTC TAGAAAAGTA ATTTATAACC CTGCCTCTAA TGGGTTTATA 
TATTAA 

 

Protein sequence

MIDKVIKKYN LDVDSMKREG TIACLTFLAS WIFFGINNAI LAYPIALTSS ILLKENFKIN 
PLEKTIRLLF LYCFIVVLSF LASNHFLLGI IINFFTIFFI AYKLSVAYTP LLYKPFLMLY 
VFTYFYKVDF QGLPRRLLSI FFGFSLIIIF HLFLNKLSYK SLIKDNINKS LFLLENQVDN 
LIFKSYNSDL QQSISKELTT ICYNLYTTRK RKILTNNLGS IQFKIYIILE NLNLDLYNLN 
KLYSKLNYNS ALIKSFLKEL KKSINILRLY LNDEISYYEI DKQLNRLNRF HEDLPDQFTF 
FHDLSISVTN LYLYLADMTT LEEGEGYKSY DLWKNTDKNQ FKFRDSLHFG TIKLNFALRI 
SLTLSLVLLL SYLFDFTKMS WLGITIMSIM QPYYEETLNK SKDRLKGNLL AIFLVIIILN 
LFQSQVVHII VLVCSLYLTY GFKSYYKLSL FTAISAICMA SLSYGVNTLA IFRVFYLALG 
ILITFLANKF LFPYNLDQGL KELSLKLIKY VNILAEDLIK NPSKNEEEII NLTIHIKLMC 
NKLTLRNIQK KDKDINRLIL LTENLTASLS YYTLLKKDLG LVCGINKDEL IKLQSKLQYS 
LKEKVPLIDI INLLDSTVDS LINCPYSRKV IYNPASNGFI Y