| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1872 |
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| Symbol | |
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| ID | 4203642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens ATCC 13124 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008261 |
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| Strand | - |
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| Start bp | 2103600 |
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| End bp | 2105891 |
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| Gene Length | 2292 bp |
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| Protein Length | 763 aa |
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| Translation table | 11 |
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| GC content | 28% |
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| IMG OID | 638082742 |
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| Product | ATP-dependent DNA helicase UvrD |
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| Protein accession | YP_696306 |
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| Protein GI | 110799377 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3973] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATA ATAAGATTTT AACTTATGAG AGAGAAGTCC TTTCAGAAAC TAAAAGGTGG
ATTGAAAGTG AAGAGGAAAG ATTAGAAGGT GAAAAGTTAA AAGCCAATGA AAAATTAGAT
GCTTTAAATA AGAAATCTAA GGGAGCCTAT GATCCAGAGA TAGAAATAGT TAAGAAGTCT
GTGGACTTTT TATCAAAGGA AGAAGAAAAA TTTAAAGAAG CTTATAATAA GCCATACTTT
GCAAGAATAG ATTTTAGGGA ATATAGAAAA GATTTTGAAA GTTTTTATAT AGGTAAATGC
GGACTTGGTG ATATGCTAGA AGGAGAAGAA AAGGTAATAG ATTGGAGAGC GCCACTAGCT
GATCTTTATT ATAGTGGTAC TCAAGGAGAG GCATATTATA AGGCACCTAT TGGGGTCATT
GAGGGTGAGC TTAGTTTAAA GAGAAAATTT CTTTTTGATG ATGAGCATAG CTTAAAGGAA
TGTTTTGATG AGGGAATTAA TGAAATTATT TTAAAATCTG GTCTTAATGA AGAAGGGGAT
GGGTTAATAG ATGAATTCCT TAGAATTAAT TTAGAAAATA GCACAGGTAC TAAATTAAAG
GATGTAGTAG CTACTATACA AAAAGAGCAG AATGATATAA TAAGAGCACC TAAAAATTCA
CCTTTAATAA TACAAGGATC AGCAGGTTCG GGAAAAACCA CTGTAGCTCT TCATAGACTA
GCTTATTTAT TATATAGATA TAAGGAAACC ATAACTGGAG AAGATATTTT AGTTGTAGCG
CCAAATAAAA TATTTTTAGA TTATATTTCT GAAGTGTTGC CTAACTTAGG AGTAGATAAG
GTTGAACAAA AAACTTTTGA GGAACTAGCC CTAAAAAAGT TAGGTATGAA GGGTAAAGTT
ATAACTAAGG ATAAAAAATT AGTAGAAATT TTAGAAAATG ATTTAGAAAA AAATAAATAT
ATAATGAATG ATAGTAAAAT AAAAGGGTCT ATATTATTTA AAGAAATGTT AGATAGATAT
ATTCAAATTC TTGAAAGAGA AGATAGCGAT ATAGATAATA TAAGAATTTG TGGATATTCA
GTTTTTGATT CAAAGGAGAT AAAAAGATTA TTCTTAAAGG ATTTAATAAA ATATCCTGTT
AACAAGAGAA AGGATGAAAT CAAAAACTAT TTTTCTAAAA AATTAGGAGA AAAGGTAAGT
AAGGTTTTAG ATAAGGTTGA TTTTCAGTAT GAGTATAGAA TAGCTAGACT TAAAAAAAGT
ATGGAAGATT CTAAGGAAAG AAGAGAAAAA CTTATAGAGC TTTATGATGA GAGAGATAAT
CATAAAAAAG AAATAAAAAA GTCTGCTAGA AAAGAATTTA ATGAATACTT TAATAGATGG
AAGGGTATAG ATACCACTAA TGTTTATAAA AATTTCTTTG AAAACAAGGA GATTTTTAAT
GAAGTAACAG ATGGAAAAAT ACCAGAGAAG TTAGCTGAAT ATATGAGAGA AAATTTGGCT
AATAATATAG ATAAAAAAAT AATAGATTCA GATGACTTAG CAGCTATGCT TTATTTAAAA
TTTAGAATAG AAGGAATAGA GGAAAGCAGC TTATTAAAAC ATATTGTCAT TGATGAGGCA
CAGGACTATT CTATGCTACA GTTATATGTT ATGTCTATGA TGGCTTCAGG AAAGTCTTTA
ACAATAGTTG GAGATATTGG TCAGGGAATA TATTCATTTA AAGGCATTAA TGATTGGAAA
GAGGCTATTA AATTGGTTTA TGATGAAAAT GCAGAGTATA AGCACTTAAG CCAAAGCTAT
AGAAGTACAG TAGAGATAAT AAATTATGCA AATAAGGTTT TAGTTAAACA AAATACCTAT
GAAGAGCCAG CAAAACCAGT TTTAAGACAT GGAATGGTTC CAGAGGAAAT TGAGTTTAAT
AATGCAAAAG AATTTTGTGA AAGATTAGAT AACATAGTTA AAAAAGTAAA AGATGAAGGA
AAAACTTCAA TAGCTATAGT TGGTAAAACC CTTGATGAAT GTAAGAAGAT AAGAACTTTA
GTTAAGAAAT ATTCAAATTA TGACTTTGAA TTAATTAAAG ATGATCAAAA AGAGTTTGAT
TTGAACTTAA TAATTATACC GTCATATCTT ACTAAAGGAT TAGAATTTGA CTGTACTATA
GTTTATAATT TAAATAAGGA AAATTATAAT GATAATGAAA TAGATAAGAA ACTTCTTTAT
GTGGTTTTAA CTAGAGCGTT ACATTATGAA TATATATTTT ATAAAGAGGA AAAATCACCT
TTAATAGGTT GA
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| Protein sequence | MSDNKILTYE REVLSETKRW IESEEERLEG EKLKANEKLD ALNKKSKGAY DPEIEIVKKS
VDFLSKEEEK FKEAYNKPYF ARIDFREYRK DFESFYIGKC GLGDMLEGEE KVIDWRAPLA
DLYYSGTQGE AYYKAPIGVI EGELSLKRKF LFDDEHSLKE CFDEGINEII LKSGLNEEGD
GLIDEFLRIN LENSTGTKLK DVVATIQKEQ NDIIRAPKNS PLIIQGSAGS GKTTVALHRL
AYLLYRYKET ITGEDILVVA PNKIFLDYIS EVLPNLGVDK VEQKTFEELA LKKLGMKGKV
ITKDKKLVEI LENDLEKNKY IMNDSKIKGS ILFKEMLDRY IQILEREDSD IDNIRICGYS
VFDSKEIKRL FLKDLIKYPV NKRKDEIKNY FSKKLGEKVS KVLDKVDFQY EYRIARLKKS
MEDSKERREK LIELYDERDN HKKEIKKSAR KEFNEYFNRW KGIDTTNVYK NFFENKEIFN
EVTDGKIPEK LAEYMRENLA NNIDKKIIDS DDLAAMLYLK FRIEGIEESS LLKHIVIDEA
QDYSMLQLYV MSMMASGKSL TIVGDIGQGI YSFKGINDWK EAIKLVYDEN AEYKHLSQSY
RSTVEIINYA NKVLVKQNTY EEPAKPVLRH GMVPEEIEFN NAKEFCERLD NIVKKVKDEG
KTSIAIVGKT LDECKKIRTL VKKYSNYDFE LIKDDQKEFD LNLIIIPSYL TKGLEFDCTI
VYNLNKENYN DNEIDKKLLY VVLTRALHYE YIFYKEEKSP LIG
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