| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPF_1867 |
|---|
| Symbol | |
|---|
| ID | 4201240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Clostridium perfringens ATCC 13124 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008261 |
|---|
| Strand | - |
|---|
| Start bp | 2100479 |
|---|
| End bp | 2101804 |
|---|
| Gene Length | 1326 bp |
|---|
| Protein Length | 441 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 638082737 |
|---|
| Product | peptidase, M23/M37 family protein |
|---|
| Protein accession | YP_696301 |
|---|
| Protein GI | 110798595 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0957526 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACAAGA GAAAATTAAC TGCAATTATA CTTAGTATAT CAATGATTTT TGCGGTTTCA
ATAAATAGCA CTAATATTGT ACAAGCTAAG ACTACAGAAG AAGCTCAACA AGAAATTGAT
AATAATAAAA ATAAAATAGA TGATCTTAAA GATAAACAAA GTGATATAAA TTCTGAGAAG
AGTAAATCTC AAAGTAAATT AGATGAAATA CAAAAACAAG TAGCTGATAA AAATCAAAAG
TTACTTACTT CTCAAAAGAA GGTTGATGAA TATAAAGGTA ATATTGACTC CTTAAAGGAT
AGTATAGATA AACTTCAAGG ACAAATTAAT GATATTCAAA GCAATATAGA TAAGAAGAAA
AAGGAAGAAG AAGAAAAAGA AGAAATACTT TCAGGTAGAA TAAGAAGTGC TTATAAATCT
AATTTAAGCA ATCAGTTTTT ATACATAATG CTTGAATCAA AAAATGTAGG GGACTTTATA
AGTAATGTAT CAAGCATAAA ATATGTAGTG GATACAGATA ATAAGTTAAT TGATGATATA
AAGAAGGTTC AAAGTGAATT AAAAAGTGAA GAATCTCAAT TAAAAAGTCA AGAAGAAGAC
TTATCAAGTA AAAAAACTAA GTTAGAAAAT GAGAAGAAAG AATATGATAC CTTAGTAAGT
CAGTATCAAT CTCAATTAAA TGAATTAAAT TCTTTAGAAG AAGAAAAACA AGCTGAAATA
AATAGCTTAA GTGAAAAAGA AAGAACAGTA TTAGATGAAA TTAATAGTTA CGAAGAAGAT
AATGCTAATC TTAAAGATTA TATAAATAAT TTAATCAATG AGAAAAAAAG TGTTAAGGTA
AATAGTGATA ATAATAGTAA AAGTAGTACA AACAATAAAA GTACAGAGGA ATCAAGCGCA
TCTAATAATG AGGGAAATTC AGAGACAAAG GCTAATTCCT CAAGTGGATT TATGAGACCA
GCTCCAGGTG GAGTTACAGA TCCCTTTGGA CCTAGAGTGC ATCCTGTTAC AGGAAAAAGA
AGTGTTCACA CAGGGGCAGA TTTAGGAGCA TCTTATGGAA CACCTATTCT TGCATCAAAG
TCAGGTACTG TTGTTGAAGC AGGATGGAAT ACTGCTTATG GTAATATGGT TATAATAGAT
CATGGAGATG GAACAAGTAC TTTATATGGA CATTCATCTA GACTTGCTGT ACAAGCTGGT
CAACATGTAT CACAAGGACA AGTAATTGCT TATGTAGGAT CAACAGGATA TAGTACAGGA
CCTCACCTTC ATTTTGGTAT AATGATAAAT GGTGAATGGG TAAATCCTAT GAATTATATA
AGTTAA
|
|---|
| Protein sequence | MNKRKLTAII LSISMIFAVS INSTNIVQAK TTEEAQQEID NNKNKIDDLK DKQSDINSEK
SKSQSKLDEI QKQVADKNQK LLTSQKKVDE YKGNIDSLKD SIDKLQGQIN DIQSNIDKKK
KEEEEKEEIL SGRIRSAYKS NLSNQFLYIM LESKNVGDFI SNVSSIKYVV DTDNKLIDDI
KKVQSELKSE ESQLKSQEED LSSKKTKLEN EKKEYDTLVS QYQSQLNELN SLEEEKQAEI
NSLSEKERTV LDEINSYEED NANLKDYINN LINEKKSVKV NSDNNSKSST NNKSTEESSA
SNNEGNSETK ANSSSGFMRP APGGVTDPFG PRVHPVTGKR SVHTGADLGA SYGTPILASK
SGTVVEAGWN TAYGNMVIID HGDGTSTLYG HSSRLAVQAG QHVSQGQVIA YVGSTGYSTG
PHLHFGIMIN GEWVNPMNYI S
|
|---|
| |